Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g03122 ATGGAAGGGGAAAAGAACTGTCATCCTCTGTTGAGAGGAGGTAGGAGAAATGAGAAAGGTTACAAACATGGGTTATCTCAAAGTCAGATGCATGTAATGTCTGCCATATGTGATGCTCTCTTTCCTTCCCTGCCATTTGACTCCCTAAATAAGGAAAGCTCAGAAAAGAAAGCCCTCTCAGCTTTCTACACAGCCTCTGGTTCTCAGGTCCCATTTCCTGATGAGGCTGCAGAGCTCTTGTTCAAGAGGGGTGTCCCAGAAGCAGTGTCCTTGGTGAGCTGGGTTCTGTTGATTCTGTCGTTCAGATTGGGAACACTGTTGCTTTGTGGAACTATTTGCTTGCAATGGAAGTGGCCTTTCATTCTCAAGTTCTCTGAGCTTTCCTTGGAGAAGAGAGAAGAAATTCTCAAGAAATGGTCAAGGGAAAAGCATTGGGTACTTCTACGGGTAGTGTTTGTGCTGGTCAAACTTGTCTGCTTCTATAATTTGTTCTCAAGGACTGATGTTAATGGGCATAATCCCCTATGGAAAGAAATGGGGTACCAGGTGGACACCAGGGAAAAGTTGACAAGAAAGGAAAGGCCCCTCCAAGAGGGATTAATAGAGACTATGTACGAAAATGATTCTACTTTAATCCAATCCCTCACTGAAAAAGGCCTTGAAGTCACTGAAGATCTAGAGCAGAACACGTACAAGATCAAATGTGATGTTGTCATTGTTGGTTCTGGATGTGGTGGAGGAGTTGCAGCTGCAGTTCTTGCAAAATCTGGTCTCAAAGTGATCGTCCTAGAGAAAGGAGAGTATTTTGTTTCCCATGATTATTCTTCCCTAGAAGGTCCATCCATGAATGAGCAATATGAATCAGGTGGAATCCTTCCAAGTCTTGATGGGAAGATGATAATCTTGGCTGGCTCAACAGTTGGTGGAGGCTCAGCTATAAACTGGTCTGCATGCATCAGAACACCTGATTCTATTCTGCGGGAATGGTCTGAAAAGTATAAAATCCCACTTTTTGCAAGCTCTGATTATCAATCTGCCATGGACTCAGTATGCAGAAGGATTGGTGTGACAGAGAAATGCAATGAGGAAAGCTTTCAAAATCAAATTCTTCGACAAGGGTGCGAAAAAATTGGTTTGAAAGTTGAGTCAGTTGCAATAAATTCTTCAGCAGATCACTATTGTGGTTCGTGCTGTTATGGTTGTAGAACAGGAGATAAAAAGGGCACTGACACTACTTGGTTGGTTGATGCTGTAGGCAAAGGTGCAGTAATCCTCACTGGCTGTAAAGCTGAGAAATTCATACTGGAAGATGAAAAGAATGGAATGAAGAGAAAGAAATGCTCAGGAGTGATTGCTGCAGCAACTTGGAGGAGTAAGGTAACAAAGAAACTCCAAATCGAATCCAAGGTAACTATTTCAGCATGTGGCTCTCTCTCCACGCCTCCTCTCATGATTTCTAGCGGACTGCAAAATTCTAACATTGGAAGGAACCTCCATCTCCACCCTGTTCAATTTGCTTGGGGGTACTTCCCAGAAGACATGACAAACTTGAATGGTAATAACTATGAGGGAGGAATCATAACTTCGATCCACAAGGTATTTGCAGAGGATTCCACCCCACAAATCATTATAGAATCACCTGCTTTAGGACCTGCATCATTTTCAGCATTGGTTCCCTGGGTTTCAGGGCATGATGTGAAAGACAGGATGGTGAAGTACGCAAGAACTGCTAACCTTTTTGCATTAATAAGAGACCAGGGATCAGGTGAAGTAAGGGGTGAGGGCAGAGTTTCTTACAGACTTGACCAAATGGACAAAGAAAATCTTCGAATTGGATTAAGGAAGGCCTTGAGGATTTTGGTTGCAGCAGGAGCTGTAGAAGTGGGCACTTACCGGAGTGATGGTCAAAGAATCAAATGTAAAGGGGTCAAGGAGGAAGATTTGGAGGAGTTTCTAGACACTGTCACAGTAGGTGGGGGTCCAAGGTCAAGGGATGAACTCTGGACCATATTTACTACTGCGCATCAGATGACAAGTTGTAGAATGGGTGCCACCGAAGAAGAAGGTGCACTTGATGTGAATGGAGAGAGTTGGGAAGCGAAAGGCTTGTATGTATGTGATGGAAGCGTTTTACCCACTGCAGTTGGTGTCAACCCCATGATAACCATCCAATCTACAGCATACTGTATTGCTAGTAAGATTGCAGAGTCGCTGAAGAGAGAAAAGCAGAGCATGGATAATTAA 2244 0.4363 MEGEKNCHPLLRGGRRNEKGYKHGLSQSQMHVMSAICDALFPSLPFDSLNKESSEKKALSAFYTASGSQVPFPDEAAELLFKRGVPEAVSLVSWVLLILSFRLGTLLLCGTICLQWKWPFILKFSELSLEKREEILKKWSREKHWVLLRVVFVLVKLVCFYNLFSRTDVNGHNPLWKEMGYQVDTREKLTRKERPLQEGLIETMYENDSTLIQSLTEKGLEVTEDLEQNTYKIKCDVVIVGSGCGGGVAAAVLAKSGLKVIVLEKGEYFVSHDYSSLEGPSMNEQYESGGILPSLDGKMIILAGSTVGGGSAINWSACIRTPDSILREWSEKYKIPLFASSDYQSAMDSVCRRIGVTEKCNEESFQNQILRQGCEKIGLKVESVAINSSADHYCGSCCYGCRTGDKKGTDTTWLVDAVGKGAVILTGCKAEKFILEDEKNGMKRKKCSGVIAAATWRSKVTKKLQIESKVTISACGSLSTPPLMISSGLQNSNIGRNLHLHPVQFAWGYFPEDMTNLNGNNYEGGIITSIHKVFAEDSTPQIIIESPALGPASFSALVPWVSGHDVKDRMVKYARTANLFALIRDQGSGEVRGEGRVSYRLDQMDKENLRIGLRKALRILVAAGAVEVGTYRSDGQRIKCKGVKEEDLEEFLDTVTVGGGPRSRDELWTIFTTAHQMTSCRMGATEEEGALDVNGESWEAKGLYVCDGSVLPTAVGVNPMITIQSTAYCIASKIAESLKREKQSMDN* 748
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g03122 747 Gene3D - 220 529 IPR036188 -
Rops8g03122 747 SUPERFAMILY FAD/NAD(P)-binding domain 233 740 IPR036188 -
Rops8g03122 747 Gene3D - 653 738 IPR036188 -
Rops8g03122 747 PANTHER LONG-CHAIN-ALCOHOL OXIDASE 21 743 - -
Rops8g03122 747 Pfam GMC oxidoreductase 236 503 IPR000172 GO:0016614|GO:0050660
Rops8g03122 747 PIRSF Lg_Ch_AO 11 744 IPR012400 GO:0046577
Rops8g03122 747 Pfam GMC oxidoreductase 596 729 IPR007867 GO:0016614
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g03122 Rops-Chr8 69118933 69122592 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops8g03122 8 743 Acyl Lipid Metabolism Gene Families AT4G28570 57.775 0.0 861
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g03122 K17756 - gmx:100808951 1225.31
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops8g03122 8 69118933 69122592 Rops8g03122 8 69118933 69122592 ECH