Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g03120 ATGGCGATGGCAGGGTTGTATCGACGCCTTCTTTCTTGTCCCCCTGCTGTTGATTTTGCTTCCTCTCAAGGCAAGCAACTTTCTCTTGAAGCCATTCAAAATGGAACCATGGAAGGCTTTTATAAGTTAGTTTCCTATTTCCAAACGCAATCCGAGCCTGCGTTTTGTGGCCTCGCTAGCTTGTCCATGGTCCTCAACGCTCTTGCCATTGATCCTGGCAGAAAATGGAAAGGACCTTGGAGATGGTTTGATGAATCTATGTTGGACTGTTGTGAACCTCTTGAAAAGATCAAAGCTAGAGGCATCTCATTTGGGAAACTTGTATGTTTGGCTCATTGTGCTGGAGCTAAAGTTGAAGCCTTTCATGCTACCCATAGCAACCTTGATGATTTTCGTAATTATGTCATCAACTGTTCAACTTCTGATGACTGTCATGTTATCTCATCATACCACAGAGCTGCTCTCAAACAAACAGGAGGTGGTCACTTTTCTCCTATTGGAGGCTATCACGTTGGAAAGGACATGGCACTTATTTTGGATGTGGCACGTTTTAAGTATCCTCCCCATTGGGTCCCACTTACTCTTCTTTGGGAAGGCATGAATTATGTTGATGAATCCACTGGACAATCCAGAGGGTTCATGCTTATATCAAGGCCTCACAGGGAACCTGGCATGCTTTATACTCTGAGCTGCAAACATGAGAGTTGGATTAGTATTGCAAAGTTCTTAATGGATGATGTTCCTTTTCTATTAAAATCAGAGGATGTGAAAGACATTCATAAGGTTCTTTCAGTTATAGTCACATCACTGCCATCTAATTTCGAAGAATTCATCAAATGGGTTGCAGAGATCAGGAGGCGAGAGGATGGTGGTCCAAGTTTAAGTGCAGAGGAGAAAGCAAGGCTTGCTGTCAAGGAAGAGGTATTGAAACAGGTGCAGGAGACAGGGCTTTTCAAACATGTAGCCTCCTTTTTGTCAAAGTCTTGCAGCAGACAGAAACCAACTTCAGGTGATGGAGACACCGTACCTGTCATTGCTGCAAATGTTTGTTGCCAAGGAGCAGAAATTTTAGGTGGGAAACTTGGCTCATCGGCAGGGTATTGCTGTCGGGAAACATGTATGAAATGCTGGAATGCTGAAGATGACAAGCCAATAACAATGGTTTGTGGGACTGTGGTTAATGGTAACACTGAACAAGGGGTTGATGTGCTGATTCCTTCATCATCTCAGAAATCATGTTGCACTTGCTCTAGTACAACTAAGTACATTAGGATGCACCCAGCTAGCAGTGATGTGCTAACAGTGCTTCTTTTATCCTTACCATCTACAACATGGGCTGGCATAGCCGATGGGCAACTTTTGAGGGAAATACATGGCCTGGTTTCAATTGAAAATCTTCCTACTTTGCTTCAAGAAGAGGTTCTGCACTTAAGACGTCAGCTACATATTCTCAAGAAATGTGAAGAGGGCAAGGTAGATGAGGATCTTGGTGTACCTTTTAAATAG 1506 0.4336 MAMAGLYRRLLSCPPAVDFASSQGKQLSLEAIQNGTMEGFYKLVSYFQTQSEPAFCGLASLSMVLNALAIDPGRKWKGPWRWFDESMLDCCEPLEKIKARGISFGKLVCLAHCAGAKVEAFHATHSNLDDFRNYVINCSTSDDCHVISSYHRAALKQTGGGHFSPIGGYHVGKDMALILDVARFKYPPHWVPLTLLWEGMNYVDESTGQSRGFMLISRPHREPGMLYTLSCKHESWISIAKFLMDDVPFLLKSEDVKDIHKVLSVIVTSLPSNFEEFIKWVAEIRRREDGGPSLSAEEKARLAVKEEVLKQVQETGLFKHVASFLSKSCSRQKPTSGDGDTVPVIAANVCCQGAEILGGKLGSSAGYCCRETCMKCWNAEDDKPITMVCGTVVNGNTEQGVDVLIPSSSQKSCCTCSSTTKYIRMHPASSDVLTVLLLSLPSTTWAGIADGQLLREIHGLVSIENLPTLLQEEVLHLRRQLHILKKCEEGKVDEDLGVPFK* 502
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g03120 501 ProSiteProfiles Phytochelatin synthase (PCS) domain profile. 1 221 IPR007719 GO:0010038|GO:0016756|GO:0046872|GO:0046938
Rops8g03120 501 Pfam Domain of unknown function (DUF1984) 231 481 IPR015407 GO:0010038|GO:0016756|GO:0046872|GO:0046938
Rops8g03120 501 FunFam Glutathione gamma-glutamylcysteinyltransferase 1 15 220 - -
Rops8g03120 501 Pfam Phytochelatin synthase 9 213 IPR007719 GO:0010038|GO:0016756|GO:0046872|GO:0046938
Rops8g03120 501 SUPERFAMILY Cysteine proteinases 14 217 IPR038765 -
Rops8g03120 501 PANTHER GLUTATHIONE GAMMA-GLUTAMYLCYSTEINYLTRANSFERASE 3 480 IPR040409 GO:0016756|GO:0046872|GO:0046938
Rops8g03120 501 Gene3D - 16 220 IPR038156 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g03120 Rops-Chr8 69098794 69103824 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g03120 K05941 - gmx:547627 884.019