Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g03117 ATGAATATCTTCTCCAAGAAACCCACCGGCAAAGAGGCTCTTCGGGAGAGTAAACGGGAAATGGCAACCGCTACTAGAGGTATAGAGAGGGAAATTGGATCATTACAATTGGAAGAAAAAAAGCTAGTTGCTGAGATAAAGAGAACTGCTAAGACAGGAAACGAGGCAGCAACTAAAACTCTAGCTCGTCAGTTGGTCAGGCTTAGGCAACAAATTTCTAATCTTCAAGGTAGTCGAGCTCAGATGAGAGGCATAGCAACTCACACCCAGGCTATGCATGCCCATTCTTCTGTTGCTGTTGGCATGAAAGGTGCTACTACGGCAATGGCAGCAATGAATAAGCAAATGGCACCAGAAAAGCAAGCCAAAGTTATGCGGGACTTCCAGAAACAATCGGCACAGATGGATATGACTACTGAAATGATGTCAGATGCCATAGATGATGCCTTGGATAATGATGAAGCTGAAGAGGAGAGTGAAGAGTTGACAAATCAGGTGCTCGATGAAATTGGTGTGGATGTTGCCTCACAGTTATCAGCAGCTCCCAAAGGGAGAGTCGCAACAAAGAATGCTGAAAATGTCAGCAGCTCGGAAATCAATGACCTTGAGAAGCGTTTGGCAGCTCTTAGAAACCCATAA 639 0.4491 MNIFSKKPTGKEALRESKREMATATRGIEREIGSLQLEEKKLVAEIKRTAKTGNEAATKTLARQLVRLRQQISNLQGSRAQMRGIATHTQAMHAHSSVAVGMKGATTAMAAMNKQMAPEKQAKVMRDFQKQSAQMDMTTEMMSDAIDDALDNDEAEEESEELTNQVLDEIGVDVASQLSAAPKGRVATKNAENVSSSEINDLEKRLAALRNP* 213
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g03117 212 Gene3D - 4 181 - -
Rops8g03117 212 MobiDBLite consensus disorder prediction 1 22 - -
Rops8g03117 212 Pfam Snf7 16 185 IPR005024 GO:0007034
Rops8g03117 212 PANTHER CHARGED MULTIVESICULAR BODY PROTEIN 3 211 IPR005024 GO:0007034
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g03117 Rops-Chr8 69076505 69079763 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g03117 K12192 - gmx:100306343 331.643
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops8g03117 8 69076505 69079763 Rops8g03117 8 69076505 69079763 ECH