Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g03107 ATGGGCTCTCTACCTGCATTCCCGAACGACCTTTCTCCCAAACAAGGCGTTAACGACAGTCACATTGACGAAACCACCCTCGCCGACCTCTTCAAATCACAGCAAAACCACCTCAACTTCTTCTTCGACCACATCGACCATTGCCAAACCCTAGCCTTCACCCGCGCCCTCCTCCACGCCTCCGGCACCGTCTTCTTCACCGGCATCGGAAAATCCGGCTTCGTCGCTCACAAGATCTCCCAGACACTCGTCTCCCTCGGCGTCCGTTCATCCTTCCTCTCTCCAGTCGACGCTCTCCACGGCGACATCGGAATCCTCTCCGATCGCGACGTTCTCGTCCTCCTCAGCAAATCCGGCGCCACCGAGGAGCTTCTCCGCCTCGTGCCATGCGCCAAGGCCAAAGGCGCACGCCTCATCTCCGTGACCTCCGTCGAAGGAAGCGCACTGTCGGCGGTGTGCGACATGACCGTGCATTTGCCGTTGGAGAGGGAGCTTTGTCCTTTCAACCTCGCGCCGGTGACTTCCACGGCAATCCAGATGGTTTTCGGTGACACCGTGGCGATCGCGCTCATGGCGGCCAGGAATCTCACCAAGGAAGACTACGCCGCCAATCATCCCGCCGGAAAGATCGGCAAGAGTCTCATCTTCAAGGTGAAAGATGTGATGAAGAAAGAGGAAGAGCTTCCAATTTGCAGGGAAACAGATTTGATTATGGATCAGCTTGTGGAGTTGACGAGTAAAGGATGTGGATGCTTGCTTGTTGTAGATGCCGATCATCATCTCATTGGAACTTTCACCGACGGTGATCTACGTCGTACTCTGAAATCTAGTGGAGAAGCCATTTTCAAACTCACTGTTGGTGAAATGTGCTACAGGAAACCAAGAGTTATTGGGCCAGATGCTATGGCAGTGGAGGCTATGAAGAAGATGGAAGCACCTCCTTCACCTGTTCAGTTTTTGCCTGTGATAAATGATGACAATGTCTTGATTGGGATTGTCACGTTGCATGGTTTGGTTTCAGCTGGGTTGTGA 1032 0.5339 MGSLPAFPNDLSPKQGVNDSHIDETTLADLFKSQQNHLNFFFDHIDHCQTLAFTRALLHASGTVFFTGIGKSGFVAHKISQTLVSLGVRSSFLSPVDALHGDIGILSDRDVLVLLSKSGATEELLRLVPCAKAKGARLISVTSVEGSALSAVCDMTVHLPLERELCPFNLAPVTSTAIQMVFGDTVAIALMAARNLTKEDYAANHPAGKIGKSLIFKVKDVMKKEEELPICRETDLIMDQLVELTSKGCGCLLVVDADHHLIGTFTDGDLRRTLKSSGEAIFKLTVGEMCYRKPRVIGPDAMAVEAMKKMEAPPSPVQFLPVINDDNVLIGIVTLHGLVSAGL* 344
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g03107 343 CDD CBS_pair_SIS_assoc 214 339 - -
Rops8g03107 343 SMART cbs_1 293 343 IPR000644 -
Rops8g03107 343 SMART cbs_1 227 275 IPR000644 -
Rops8g03107 343 Pfam SIS domain 58 188 IPR001347 GO:0097367|GO:1901135
Rops8g03107 343 PIRSF KdsD_KpsF 12 343 IPR004800 GO:0005975|GO:0016853
Rops8g03107 343 Pfam CBS domain 286 341 IPR000644 -
Rops8g03107 343 Pfam CBS domain 218 275 IPR000644 -
Rops8g03107 343 Gene3D - 21 212 - -
Rops8g03107 343 ProSiteProfiles CBS domain profile. 289 343 IPR000644 -
Rops8g03107 343 CDD SIS_Kpsf 62 189 IPR035474 -
Rops8g03107 343 SUPERFAMILY SIS domain 28 342 IPR046348 GO:0097367|GO:1901135
Rops8g03107 343 PANTHER - 2 343 - -
Rops8g03107 343 ProSiteProfiles CBS domain profile. 222 281 IPR000644 -
Rops8g03107 343 Gene3D - 213 341 IPR046342 -
Rops8g03107 343 NCBIfam KpsF/GutQ family sugar-phosphate isomerase 62 333 IPR004800 GO:0005975|GO:0016853
Rops8g03107 343 ProSiteProfiles SIS domain profile. 53 196 IPR001347 GO:0097367|GO:1901135
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g03107 K06041 - gmx:100805755 564.688
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops8g03107 8 68913606 68915276 Rops8g03107 8 68913606 68915276 ECH