Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g03100 ATGTCCTGCATAAGTCTAAGGCTTCCCCCTGCCAAAAAGGTGTGGAAGAGCTTAACTTCTACCCTTGTTAAACTTCATAAGATTCGGAAGTCCAAAGCCATGAAAAAACCCAGAAAGCAACTAAAAGCCACCACTACACCGGCTACCGGGGCCACTCCTAAACCTAAGTTCCTTGCTACTAGGCGATTTCGCTGCAAAAGAATAACCACTGTCAAAAGTGTCATCTACGGCTTCAACAAAAAGCCTGCACCTGTGTATATTGATAAGCTCTTTAAGGAGCCTTCGTGTGACTTGGTGATGGAGCATGTGAACTTGGTGATGGAGCATGTGAAGCCACAGACAGCACGCAAACCACGAAAAGAAAAGACTGCAAAACATCATGGGAAAGAAGTAGCAGGAACAAGCAAGGCAGGTGGTGGATCTGAGAAACCCTGCACCTCAGATGATATGTGGGAGTCACTGGCATTAGCCTCACCTCAGATGCAAGGAATAGATGAACGGGCAGAGGAGTTCATCGCCAGATTTAGAGAAGAGATGGCGGCGCAAGAGATGTTAGCCAGAAATTTGTAG 570 0.4667 MSCISLRLPPAKKVWKSLTSTLVKLHKIRKSKAMKKPRKQLKATTTPATGATPKPKFLATRRFRCKRITTVKSVIYGFNKKPAPVYIDKLFKEPSCDLVMEHVNLVMEHVKPQTARKPRKEKTAKHHGKEVAGTSKAGGGSEKPCTSDDMWESLALASPQMQGIDERAEEFIARFREEMAAQEMLARNL* 190
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g03100 189 MobiDBLite consensus disorder prediction 111 147 - -
Rops8g03100 189 MobiDBLite consensus disorder prediction 31 54 - -
Rops8g03100 189 Pfam Cotton fibre expressed protein 163 182 IPR008480 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g03100 Rops-Chr8 68798605 68799245 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g03100 - - lja:Lj1g3v4483820.1 227.254