Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Rops8g03080 | ATGGATTCGTTGAACGACGCCGCTTTGGGTTCCTCGGAGATGGAGAAGTTCCTGTGCGAGTTGTTGCTGGACTCGACCCAACCCATTTCGGAGCGCTTCAGAGCCCTCTTCTCTCTCCGCAACCTCAAAGGTCCCGCCCCTCGCAATGCCCTTATTCTCGCCACGAGGGATTCGTCGAATTTGTTGGCTCATGAAGCTGCTTTTGCGTTGGGTCAAATGCAAGAATTGGAAGCCATCCCTGCTTTAGCCTCTGCTCTTAATGATCTTTCTTTGCATCCCATTGTTCGCCATGAGGCAGCTGAAGCACTTGGTGCTATTGGTTCAGATGGTAATATTCCTCTATTAAAGAGTAGTTTGGATTCAGATCCAGCTCAGGAGGTTCGAGAAACGTGTGAATTGGCTCTTGAACGTATTCAGCATTTGAAATCTGCTGCTAATACTGATGAACAGTCTGCAACTGATATATCTCCTTTTAAGTCTGTTGATCCTGCTACACCAGCCACCTCTTGTTCTTCTGTTGATCAACTAAGGGAATTACTTCTTGATGAAGGAAAAGGGATGTATGAGCGCTATGCAGCTCTTTTTGCACTTCGAAATGATGGTGGAAATGAAGCTGTGGCTGCTATTATTGATTCTTTGGGTTCAAAGAGTGCTCTACTACGACACGAGGTTGCCTACGTTTTGGGCCAATTGCAAGACAAAGCTGCTTCAGCTGCTCTATCCAATATACTTAGAGATGTGAATGAGCACCCAATGGTTAGACATGAGGCTGCTGAAGCTCTTGGTTCAATTGCAGATGATCAAAGTGTAGCCCTTCTTGAGGAGTTTACAGCAGATCCAGAGCCTCTTGTCTCACAAAGTTGTCAAGTTGCTCTAAGCATGCTAGAATTTGAACGATCGGGGAAATCATTTGAGTTTCTTTTCATGCGCACTCCAGTTGTGCATTAA | 948 | 0.4568 | MDSLNDAALGSSEMEKFLCELLLDSTQPISERFRALFSLRNLKGPAPRNALILATRDSSNLLAHEAAFALGQMQELEAIPALASALNDLSLHPIVRHEAAEALGAIGSDGNIPLLKSSLDSDPAQEVRETCELALERIQHLKSAANTDEQSATDISPFKSVDPATPATSCSSVDQLRELLLDEGKGMYERYAALFALRNDGGNEAVAAIIDSLGSKSALLRHEVAYVLGQLQDKAASAALSNILRDVNEHPMVRHEAAEALGSIADDQSVALLEEFTADPEPLVSQSCQVALSMLEFERSGKSFEFLFMRTPVVH* | 316 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Rops8g03080 | 315 | MobiDBLite | consensus disorder prediction | 145 | 167 | - | - | |
| Rops8g03080 | 315 | Pfam | PBS lyase HEAT-like repeat | 253 | 276 | IPR004155 | - | |
| Rops8g03080 | 315 | Pfam | PBS lyase HEAT-like repeat | 220 | 246 | IPR004155 | - | |
| Rops8g03080 | 315 | FunFam | Deoxyhypusine hydroxylase | 164 | 305 | - | - | |
| Rops8g03080 | 315 | Coils | Coil | 124 | 144 | - | - | |
| Rops8g03080 | 315 | SMART | E-Z type HEAT repeats | 93 | 122 | IPR004155 | - | |
| Rops8g03080 | 315 | SMART | E-Z type HEAT repeats | 187 | 216 | IPR004155 | - | |
| Rops8g03080 | 315 | SMART | E-Z type HEAT repeats | 60 | 89 | IPR004155 | - | |
| Rops8g03080 | 315 | SMART | E-Z type HEAT repeats | 29 | 58 | IPR004155 | - | |
| Rops8g03080 | 315 | SMART | E-Z type HEAT repeats | 218 | 247 | IPR004155 | - | |
| Rops8g03080 | 315 | SMART | E-Z type HEAT repeats | 251 | 280 | IPR004155 | - | |
| Rops8g03080 | 315 | SUPERFAMILY | ARM repeat | 93 | 294 | IPR016024 | - | |
| Rops8g03080 | 315 | Hamap | Deoxyhypusine hydroxylase [DOHH]. | 15 | 305 | IPR027517 | GO:0008612|GO:0019135 | |
| Rops8g03080 | 315 | PANTHER | PBS LYASE HEAT-LIKE PROTEIN | 20 | 300 | - | - | |
| Rops8g03080 | 315 | FunFam | Deoxyhypusine hydroxylase | 6 | 156 | - | - | |
| Rops8g03080 | 315 | Pfam | HEAT repeats | 51 | 135 | - | - | |
| Rops8g03080 | 315 | Gene3D | - | 160 | 304 | IPR011989 | - | |
| Rops8g03080 | 315 | Gene3D | - | 6 | 156 | IPR011989 | - |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Rops8g03080 | K06072 | - | gmx:100815364 | 530.406 |