Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g03077 ATGAATTCAGATTGGGGGAGGAAGACAGGAACGAGAACAACGGAGCACTCAGCAACCCTAATCCCAGGCCTACCAAACGACGTCGCAATCACTATCCTCTCTCGTGTTCCATACTCTTACCACGCCGGTCTCAAAGCCACATGCAAGGCATGGAAATCGATTCTCTCATCGAAATCCTTCCTCAACTCCCTTGGTCGTAACCACCTCCTTTGCATCTTCCCACAAGACCCTGCCATCGCAACCTCGTACCTCTTCGACCCTTACGAGGTCGCATGGTGTCCCCTCCCACCCATGCCTTGTAACCCTCATGTGTACGGTCTCTGTAACTTCGCCGCCATCCCCTTGGGCCCACACATCTACATCCTCGGAGGCTCCCTCTTCGACACACGCTCTTTCCCCATCGACCGTCCCTCTGCCACGTCATCCACTTTCCGTTTCAACTTCCATGATTTCTCTTGGGAGCACCGTGCCCCTATGCTCTCGCCACGTGGCAGCTTCGCCTGCGCCTCGATTCCCTCCTCCGGGAATATTCTCGTCGCCGGCGGTGGGTCCCGTCACACGCTTTTCGCCGCCGCTGGGACACGTATCCGCTCGGCGGAGCGGTACGATGTTAAGACGAACCGCTGGGTCGCCGTGGATTCCCTGCCGGGGTTCCGCGCCGGGTGCGTCGGGTTTATCGGCGGCGGTGGGAGGCAGTTCTGGGTGATCGGAGGGTACAGTGAGTCGAGGACGGTTTCGAGGATTTTTCCGGTGGATGAGTATTGTAGGGATGCTGTGGTGATGGAATTGGAGAATGATACGTGGAGAGAGATTGGGGATATTTGGGAAGATGGTGAAATTGTTAGGGCTGGGAAGATTGTTGTGGCTTATGATCATGGCTCCCCCATGGTTTTCATGCTTCATCTCTATGATATCTTGAGATATGACATGTCTTCAAATCGTTGGCTATACGAGTCTCGTGTGCCAAGAAGAACTCCTCGTCGTTCGCTGCCATTTGGTTTTGTAGTAGTAGACCAGGAGCTGTATGTATTGACACATTTATATGATGATGATTTCGCAGAAACTCGAAGGACCAGACAAAAGAGGACAGGAACTATGTGCTTTCAAATCTATAACCCAAAAAAGAAGACCTGGAGAACTCTGAAAACAAAGTCACCTTTCGCTTACCCTATGGATATCAATAGTGCTGTGTTGAGGTCAATTTGTCTATGA 1212 0.5215 MNSDWGRKTGTRTTEHSATLIPGLPNDVAITILSRVPYSYHAGLKATCKAWKSILSSKSFLNSLGRNHLLCIFPQDPAIATSYLFDPYEVAWCPLPPMPCNPHVYGLCNFAAIPLGPHIYILGGSLFDTRSFPIDRPSATSSTFRFNFHDFSWEHRAPMLSPRGSFACASIPSSGNILVAGGGSRHTLFAAAGTRIRSAERYDVKTNRWVAVDSLPGFRAGCVGFIGGGGRQFWVIGGYSESRTVSRIFPVDEYCRDAVVMELENDTWREIGDIWEDGEIVRAGKIVVAYDHGSPMVFMLHLYDILRYDMSSNRWLYESRVPRRTPRRSLPFGFVVVDQELYVLTHLYDDDFAETRRTRQKRTGTMCFQIYNPKKKTWRTLKTKSPFAYPMDINSAVLRSICL* 404
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g03077 403 CDD F-box_AtAFR-like 20 60 - -
Rops8g03077 403 Gene3D - 62 390 IPR015915 GO:0005515
Rops8g03077 403 Pfam F-box domain 23 60 IPR001810 GO:0005515
Rops8g03077 403 SUPERFAMILY Kelch motif 73 382 IPR015915 GO:0005515
Rops8g03077 403 Pfam Kelch motif 175 216 IPR006652 GO:0005515
Rops8g03077 403 PANTHER F-BOX/KELCH-REPEAT PROTEIN OR23 10 403 - -
Rops8g03077 403 SMART kelc_smart 118 173 IPR006652 GO:0005515
Rops8g03077 403 SMART kelc_smart 176 228 IPR006652 GO:0005515
Rops8g03077 403 SUPERFAMILY F-box domain 18 102 IPR036047 GO:0005515
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g03077 - - gmx:100820159 601.282
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops8g03077 8 68423180 68427329 Rops8g03077 8 68423180 68427329 ECH