Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g03055 ATGGGTTTCTGGGTCAGCACTCTGTGGAAGTTTGGAACACAACTCATTTTTATGGCCATTGCTCTGAAATCATCTTGCTTCTTGCAATTGAAGAAACCTGAGACCAGTTTCCAGGTTTGTCTTCCCTCCAAGAAAGCTATAATCTCTGTTAAAAGATACACTCCAGTGGCTTCTATCAGGACCATGGAAAAAGTAGGGCTCTCCGAAACATTCAACAGGCTGAAAAAACAAGGAAAAGTGGCTTTCATCCCATTCATCACAGCTGGTGATCCTGACCTTTCAACCACTGCAGAAGCGTTGAAAGTGCTTGATTCATGTGGGTCTGACATAATTGAGCTGGGTGTTCCATACTCTGATCCATTGGCAGATGGTCCTGTTATCCAGGCTGCTGCTACCCGATCACTGGCAAGAGGGACCAATTTTAATGCGGTCATTTCTATGTTGAAGGAGGTTGTTCCGCAATTATCTTGTCCAATTGCACTGTTTTCTTACTACAATCCAATACTGAAGCGTGGTACTGGGAGATTTATGTCCACCGTAAGAGACACTGGTGTAAATGGGCTTGTAGTCCCAGATGTTCCACTGGAGGAGACGGAAGTTTTAAGGACAGAAGCTAAGAAAAATGGAATTGAACTGGTACTCCTCACAACACCCACCACTCCAACAAACCGAATGAAAGCCATTGTTGATGCTTCAGAAGGATTTGTGTATCTTGTGAGCTCAGTGGGGGTCACCGGAGCCCGAGCATCAGTTAGTAATAAAGTTCAGGGTCTTTTGCAGGAAATTAAAGAGGCAACAACTAAGCCTGTGGCAGTTGGTTTTGGAATATCAAAACCCGAGCATGTGAAACAGGTAGCGGGATGGGGAGCTGATGGTGTGATTGTTGGTAGTGCTATAGTGAAGTTGCTTGCTGAGGCCAAATCTCCTCAAGAGGGATTGAAAGAACTGGAAGATTTCACCCGCTCCTTAAAGTCAGCACTTCCTTGA 987 0.4498 MGFWVSTLWKFGTQLIFMAIALKSSCFLQLKKPETSFQVCLPSKKAIISVKRYTPVASIRTMEKVGLSETFNRLKKQGKVAFIPFITAGDPDLSTTAEALKVLDSCGSDIIELGVPYSDPLADGPVIQAAATRSLARGTNFNAVISMLKEVVPQLSCPIALFSYYNPILKRGTGRFMSTVRDTGVNGLVVPDVPLEETEVLRTEAKKNGIELVLLTTPTTPTNRMKAIVDASEGFVYLVSSVGVTGARASVSNKVQGLLQEIKEATTKPVAVGFGISKPEHVKQVAGWGADGVIVGSAIVKLLAEAKSPQEGLKELEDFTRSLKSALP* 329
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g03055 328 Coils Coil 248 268 - -
Rops8g03055 328 Gene3D Aldolase class I 65 328 IPR013785 -
Rops8g03055 328 NCBIfam tryptophan synthase subunit alpha 71 324 IPR002028 GO:0004834|GO:0006568
Rops8g03055 328 Pfam Tryptophan synthase alpha chain 71 326 IPR002028 GO:0004834|GO:0006568
Rops8g03055 328 Hamap Tryptophan synthase alpha chain [trpA]. 77 326 IPR002028 GO:0004834|GO:0006568
Rops8g03055 328 ProSitePatterns Tryptophan synthase alpha chain signature. 111 124 IPR018204 GO:0004834
Rops8g03055 328 SUPERFAMILY Ribulose-phoshate binding barrel 67 307 IPR011060 -
Rops8g03055 328 FunFam Tryptophan synthase alpha chain, chloroplastic 65 328 - -
Rops8g03055 328 PANTHER TRYPTOPHAN SYNTHASE, ALPHA CHAIN 60 327 IPR002028 GO:0004834|GO:0006568
Rops8g03055 328 CDD Tryptophan_synthase_alpha 81 324 IPR002028 GO:0004834|GO:0006568
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g03055 K01695 - gmx:100808400 526.939