Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g03041 ATGGATTGGCTTTCAAAGATTTGCACTATTGTGATCGTGTTCTTAGGTAGCATAATCTCTCACGTGTTCGGTCTCTCAATCAGTTTACACGACGTGGATTGCGTATCAGAGCACGTTCTCCATGACGGTGACACTGTTTCTGGGAATTTTGTAGTCATGGACCACGATATTTTTTGGAGCTCAGATCATCCTGGAATTGATTTCACCGTGACATCTCCGGGAGGACATATGGTGCACTCTTTGAAGGGAACGTCAGGGGACAAGTTTGAGTTCAAAGCCTCACAAAGTGGAATTTACAAGTTCTGCTTTCACAACCCTTTCTCTACGCCCGAGACTGTGTCTTTCTACATTCACGTTGGTCACATCCCAAACGAGCATGACTTAGCTAAAGATGAGCATTTTGACCCAATTAAAGTGAAGATTGCTGAGTTGAGAGAAGCATTGGAGTCTATTGTAGCAGAGCAAAAGTACTTGAAAGCACGCGATGCCAGACATCGATATACAAACGAGAGCACTAGAAAACGTGTTGTCTTCTACACAGTCTTGGAGTATATTTTATTCGCTTCTACAAGTTTATTACAAGTAGTATACATTCGTCGCCTCTTCAGCAAATCATTTGCCTACAACCGAGTGTAG 636 0.4277 MDWLSKICTIVIVFLGSIISHVFGLSISLHDVDCVSEHVLHDGDTVSGNFVVMDHDIFWSSDHPGIDFTVTSPGGHMVHSLKGTSGDKFEFKASQSGIYKFCFHNPFSTPETVSFYIHVGHIPNEHDLAKDEHFDPIKVKIAELREALESIVAEQKYLKARDARHRYTNESTRKRVVFYTVLEYILFASTSLLQVVYIRRLFSKSFAYNRV* 212
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g03041 211 PANTHER TRANSMEMBRANE EMP24 DOMAIN-CONTAINING PROTEIN 22 204 IPR015720 -
Rops8g03041 211 SUPERFAMILY Supernatant protein factor (SPF), C-terminal domain 39 128 IPR036598 -
Rops8g03041 211 Pfam emp24/gp25L/p24 family/GOLD 30 202 IPR009038 -
Rops8g03041 211 SMART EMP24_GP25L_2 24 203 IPR009038 -
Rops8g03041 211 ProSiteProfiles GOLD domain profile. 32 119 IPR009038 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g03041 Rops-Chr8 67543024 67544524 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g03041 K20347 - gmx:100789501 372.089
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops8g03041 8 67543024 67544524 Rops8g03041 8 67543024 67544524 ECH