Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g03030 ATGTCGTCGTTGATAACGGTTTTCCTCCATCAAGGTGGCGGCACTGCCGTCATCGACGGCGGTCTTGCGACGGAGCTGGAACGCCACGGCGCCGACCTTAACGATCCTCTTTGGAGCGCCAAATGCCTCCTTTCTTCCCCTCACCTCATTCGCCAGGTACACCTTGATTATCTGGAAAATGGTGCAGACATTATAATCACAGCTTCTTATCAAGCTACTATTCAAGGTTTTAAAGCGAAAGGCTTTTCTGATGAAGAAGGTGAAGCCTTGCTTAGAAAAAGTGTTGAAATTGCTCGTGAGGCCCGTGATGTGTATCATGAAAGATGTGCTGTGAGCTCTCCGGGTGGTGGGGCTGATGGTAGAATCCTCAAAAAACGCCCTATCCTAGTTGCAGCATCAGTGGGGAGCTATGGAGCTTATTTGGCTGACGGATCAGAGTACAGTGGGAATTATGGTGATGCTATCACATTGGAAACTCTTAAAGATTTTCATCGGAGAAGAGTTCAGATTTTAGCAGATTCAGGTGCTGACCTGCTTGCATTTGAAACAGTACCAAATAAGCTTGAAGCTCAGGCTTATGCAGAGCTTCTGGAAGAAGAGGACATAAAGATTCCAGCGTGGTTTTCTTTTAACTCTAAGGATGGAATTAATGTCGTTAGTGGTGATTCTATAGAGGAATGTGGCTCCATTGCTGAATCATGCAACAAAGTTGTTGCTGTTGGAATCAACTGTACTCCACCTAGATTTATACATGATCTGATCATTTTGCTTAAGAAGGTGACTTCAAAACCAATTGTTATATATCCTAACAGTGGGGAAACTTATGATGCTGTGCAAAAGGAGTGGGTGCAAAATACAGGTGTAACAGATGAAGATTTTGTCTCGTATGTACATAAATGGTGCGAGTTAGGGGCTTCCCTTGTGGGTGGCTGTTGCAGAACGACCCCAGCTACTATTAGAGGGATATACAAGATACTCTCCAGTGGTCAATCTGCTACTCTTGCCACAGAGTAA 1014 0.4467 MSSLITVFLHQGGGTAVIDGGLATELERHGADLNDPLWSAKCLLSSPHLIRQVHLDYLENGADIIITASYQATIQGFKAKGFSDEEGEALLRKSVEIAREARDVYHERCAVSSPGGGADGRILKKRPILVAASVGSYGAYLADGSEYSGNYGDAITLETLKDFHRRRVQILADSGADLLAFETVPNKLEAQAYAELLEEEDIKIPAWFSFNSKDGINVVSGDSIEECGSIAESCNKVVAVGINCTPPRFIHDLIILLKKVTSKPIVIYPNSGETYDAVQKEWVQNTGVTDEDFVSYVHKWCELGASLVGGCCRTTPATIRGIYKILSSGQSATLATE* 338
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g03030 337 PIRSF BHMT 6 116 IPR017226 GO:0008168|GO:0008270|GO:0009086
Rops8g03030 337 PIRSF BHMT 279 334 IPR017226 GO:0008168|GO:0008270|GO:0009086
Rops8g03030 337 Pfam Homocysteine S-methyltransferase 17 325 IPR003726 -
Rops8g03030 337 PANTHER ZGC:172121 12 328 - -
Rops8g03030 337 SUPERFAMILY Homocysteine S-methyltransferase 12 328 IPR036589 -
Rops8g03030 337 ProSiteProfiles Homocysteine-binding domain profile. 4 326 IPR003726 -
Rops8g03030 337 FunFam Homocysteine S-methyltransferase 5 325 - -
Rops8g03030 337 Gene3D - 8 324 IPR036589 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g03030 Rops-Chr8 67355342 67365246 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g03030 K00547 - gmx:100790567 575.474
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops8g03030 8 67355342 67365246 Rops8g03030 8 67355342 67365246 ECH