Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g03009 ATGGCGAAGCGACCTTGTCCATCGGAAAACCCTAGAGTGGAGGTGGAGCATCTCCTCGACGCATTCCTCTCCCTCTCGGAACTTCCTTCTCTCTCACTCGATCTCTCCTTCGAGAAGCTTCTCCAATCAATGCCTTCCTCCGACGACTCCGATCTCATCGATCGCGCTTTCAAAATGGGCTCTCTTCTCCTCCACGCCGCCAAACTCTCCTCTCGCAAACGCGCTTCTCACCACAACTCTCTCGCTTGGCCTCTCCCTCCCGACCTCACCATCAAGGTTTTTTCAATGCTTGATACGCAGAGCTTGTGTTATGCTTCAGCTACTTGTTCATTGTTTAGTAAATGTGCTAAAGATCCTATGTGCTATGCGAATCTTGATTTGACAACACTTGTTCCCAAGGTTAACAATGCGGTAGTTGCTACCATGATTCAGCGAGCTGGGAAGGCACTCAGGTCTCTCAAGCTTGGTGTTGTCCATAGTGGTACTACTTTACCTGGATCTTGTCAACCATCGGTTTGTACCGTCAGAGGATGGACTGATAAGAGATCTCGTCAAGGGAAAGAGTCATCTGTTCTTACAAGATGCTGTTTAAGCCCTTTAAGTGGGGATGGTGGTGCTCCAGGGGCTCTTCTGAGAAAGTTGCACTTGTACAATATTGAGAGAATGGATAATGCATCCCTTGGTGGGGCATTGTCAGCATGCCCTTCTCTCCTTGATCTGAAAATTGTTGGGCTCCATGTTGAACTGCGGCAAACATTAATGTCAGTAAGTGCTAACTGCCACTTGATCAAGTGTTTGTTTTTTGAGTCTTCTAAAACAGGTAGAGATGACAGCTTGAAAGCGCAAACCTGTTCTGAGCTAGTAAACAATTGTCCTCATCTAACTTCTTTATCTCTCCGAGGGTTTAAGCTACATGATTGTAAAGTTCGCATACTGGTTAAGGGATTTCGGAAACTGAAATATGTTGACTTTTCAACATCTTATTCAATCACAGGAAATTTCTTAAGAAACCTTGGAAGCTGCAATGGTGGGAATTTGCTTGAGGTCTTAATTTTAAGGGATTGTATGCATCTCAAAGAGATGGAAGTTGCTAGGTTGTTGACAGCAATTCTTGCAGGAGATTTCAAAATGCTTGTACATCTTGACATATCCAATAGGGAAGGCTTAGCATCTGGGGCTGACTGGTATCACAGGTGCTATGACTCTAGTATAATGCCTATAAAGCAGGTTTTGGAAGCAAGGCCTGATATGTGTTTGGTGGCTGAATATCCATCAGAAGGAAGTTACATTGTTGAGGCATTTGAGACTGATATGAATAGCGATATTAGTCTGCCCTCACAGTTAAGCAGTCACACGTCAGATGGTTCAATTTTTATGAGTACATCTGAAAGCAGCTGCAATAGTGATCAGGGTAGTGGCAATGAGGATGGTCAAGATGCAAGCTATGTGATTTATGAGGAAAGCTCAGATGAGATTGACTTTCTGACCCTGTAG 1494 0.4431 MAKRPCPSENPRVEVEHLLDAFLSLSELPSLSLDLSFEKLLQSMPSSDDSDLIDRAFKMGSLLLHAAKLSSRKRASHHNSLAWPLPPDLTIKVFSMLDTQSLCYASATCSLFSKCAKDPMCYANLDLTTLVPKVNNAVVATMIQRAGKALRSLKLGVVHSGTTLPGSCQPSVCTVRGWTDKRSRQGKESSVLTRCCLSPLSGDGGAPGALLRKLHLYNIERMDNASLGGALSACPSLLDLKIVGLHVELRQTLMSVSANCHLIKCLFFESSKTGRDDSLKAQTCSELVNNCPHLTSLSLRGFKLHDCKVRILVKGFRKLKYVDFSTSYSITGNFLRNLGSCNGGNLLEVLILRDCMHLKEMEVARLLTAILAGDFKMLVHLDISNREGLASGADWYHRCYDSSIMPIKQVLEARPDMCLVAEYPSEGSYIVEAFETDMNSDISLPSQLSSHTSDGSIFMSTSESSCNSDQGSGNEDGQDASYVIYEESSDEIDFLTL* 498
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g03009 497 Gene3D Ribonuclease Inhibitor 79 395 IPR032675 -
Rops8g03009 497 MobiDBLite consensus disorder prediction 445 477 - -
Rops8g03009 497 FunFam F-box protein isoform A 78 370 - -
Rops8g03009 497 SUPERFAMILY RNI-like 205 395 - -
Rops8g03009 497 PANTHER F-BOX/TPR REPEAT PROTEIN POF3 84 364 - -
Rops8g03009 497 MobiDBLite consensus disorder prediction 445 478 - -
Rops8g03009 497 Pfam F-box-like 85 127 IPR001810 GO:0005515
Rops8g03009 497 SUPERFAMILY F-box domain 73 128 IPR036047 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g03009 Rops-Chr8 67069235 67074386 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g03009 K10268 - gmx:100786317 862.833
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops8g03009 8 67069235 67074386 Rops8g03009 8 67069235 67074386 ECH