Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g03003 ATGGTGTCGCTGCGCTTCCCTTTCTTGTTTTGTCAGCCCCAACCACCTCAACCCCCACGCCCATTCTCCGCATTCGCTGCAGCTGCCGCCACAGCCGGAGCCACCGCCACGTTCGTCGCCCTCTCCTCCGACCGTGACCACCCCTTTCTCCGAAATGCCTTGAGTTCGTTATTCTCTTCTAACCACTCCTTGCCTCTCTGGGGTTCGCTTAGTTTGGCCGACAATGGGGTTCCCGTGGTTGAATCAAAGACCGGAGCTTCGTTCCCTTCGGTTCTAGAATCTTCTCAGAAACTTTGTGGAATTGGGTTGCGGAGGAAAAGCATTTTGGGATTGAAGAACATCGATGTTTACGCATTTGGTGTTTATGCTGATGATAATGATATAAAGAGATATTTGTTTGAAAAATATGGGAAATTGTCTGCGTCTCAATTGAAGGGAAATAAGGAGTTTACGGAAGATCTAATGGAAAATGATATATCCATGACAATTAGACTTCAAATTGCGTATAGCAAATTGAGCATTCGTTCTGTACGTAGTGCATTTGAAGAGTCTGTAGGAAGCAGACTGCAAAAGTATGGGGGATCAGACAATAAAGAATTGCTTCAAAGGTTCACCTCCCAGTTTAAAGATGAATACAAAATACCACGTGGATCTGTAATTCATCTCTCAAGAGAGAAGGGCTACGTTCTTCGCACATCAATTGACGGACAGGAAGTGGGAAGCATCCAGAGTAAACTCCTATGTAAGTCAATCCTAGATTTGTATTTTGGTGAGCAACCATTTGATAAACAGGCCAAAGAAGACATTGAGCAAATCATGGCATCTTACCTCCAGAAATAG 840 0.4464 MVSLRFPFLFCQPQPPQPPRPFSAFAAAAATAGATATFVALSSDRDHPFLRNALSSLFSSNHSLPLWGSLSLADNGVPVVESKTGASFPSVLESSQKLCGIGLRRKSILGLKNIDVYAFGVYADDNDIKRYLFEKYGKLSASQLKGNKEFTEDLMENDISMTIRLQIAYSKLSIRSVRSAFEESVGSRLQKYGGSDNKELLQRFTSQFKDEYKIPRGSVIHLSREKGYVLRTSIDGQEVGSIQSKLLCKSILDLYFGEQPFDKQAKEDIEQIMASYLQK* 280
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g03003 279 Gene3D - 80 255 IPR016088 -
Rops8g03003 279 PANTHER FATTY-ACID-BINDING PROTEIN 1 1 277 IPR044228 -
Rops8g03003 279 Gene3D - 127 270 IPR016089 -
Rops8g03003 279 Pfam Chalcone isomerase like 97 269 IPR016087 -
Rops8g03003 279 SUPERFAMILY Chalcone isomerase 82 277 IPR036298 GO:0016872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g03003 Rops-Chr8 66979376 66981942 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g03003 - - gmx:100785266 404.831
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops8g03003 8 66979376 66981942 Rops8g03003 8 66979376 66981942 ECH