Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g03002 ATGATTTCTCGATTGTCCTTTAATCCTAGTCTCACTCCTTTTGCGAGATCTGTAGTCAAATCCTGCTATCCATTCAAGTTCTTCCTTCAATCATCTTATGATTCTTTGGGAGAATATGTTAATGAAGTGTCTCAGGATAATTTGCCATCCTTCGAATGGCTTGAGGATGACATAGACGAGGAAGCTCTTGACCAGGTTTTGGTTACAAAGGAGATTAGAAAGAAAATAAATGCCATCAAATTGATGTTGGGGTCCATGGAAGATGGAGAGATAAGCATATCAGCTTATGACACAGCATGGATTGCTCTAGTGAAAAATGATGAAGATGGAAATGCCCCTCAATTCCCATCTTGTCTTGAATGGATTGCCAATAATCAACTCCCTGATGGTTCGTGGGGAGACAGTGAAATATTCGTAGCCCATGACCGGATTCTTAACACTTTAGCTTGTGTTATTGCATTAAGATCATGGAATATGCATCCTGAGAAGTGTGAGAAGGGAATGCAATTCTTTACTGAAAATGTATACAAGCTTCAGGATGAGAATGCTGAGCATATGCCAATCGGAATACCGAGAGAGATCATGCACAAAGTGTCCACAACTCTGCTCCATAGTTTGGAGGGAATGCCAGATTTGGAGTGGAAACAGCTTCTAAAGCTTCAGTCCCAAGACGGGTCATTCTTATTCTCTCCATCCTCCACTGCTTTTGCTCTCATGCAAACCAAAGATGAAAATGCTCTCAAATACCTGGACAAAACAGTCAAGCTATTCAACGGGGGAGTTCCAAATGTCTACCCAGTGGATTTGTTTGAACACATCTGGGTTGTTGATCGGCTAGAACGCCTTGGAATTTCGAGATATTTTCAGCAAGAGATCAAGTCCTGTATGAGTTATGTTTCAAGATATTGGACTGAGAAAGGTATTTGCTGGGCAAGGAATTCAGAGGTTCAAGATATAGATGACACGGCAATGGGATTTAGACTCCTAAGGTTGCATGGCTACCATGTTTCACCCAATGTGTTCAAGCAATTTGAGAAAAGTGGTGAGTTCTTCTGCATTCCTGGGCAGTCAACCCAAGCTGTGACTGGAATGTTTAATCTTTATAGAGCTTCTCAAGTGCTATTTCAAGGAGAGAAGATTCTTGAGGATGCTAAGTACTTCTCAGCCAAATTTTTAACTGAGAAACGTGCTGCTAATGAGCTCCTAGATAAATGGATCATAGCCAAAGATTTACCTGGCGAGGTGGGTTATGCGCTGGACGTGCCCTGGTATGCAAGCTTACCCCGATTGGAGACAAGATTTTACATTGAACAATATGGTGGTGAAAGTGATGTTTGGATTGGCAAGACCCTTTACAGGATGCCCAACGTGAATAATGAGGTTTATCTCGAGCTTGCAAAGTTGGATTACAACAACTGTCAAGCAGTGCATTGTACAGAATGGGAAAAAATCCAAAGGTGGCACTTGGAATCAGAACTGAAGGGGTTTGGATTGAGCAAACAAAGTCTCCTGTTTACTTATTTTATGGCAGCAGCCAGCATATTTGAGCCTGAGAGGTCTCTAGAAAGACTTGCATGGGCTAAAACTGCAGCTTTGCTTCAAATACTGAAGTCCAATATAAAAGATGAAGAAACTAGGAGTGAATTTGCAGATCATTTCAATAACAACATTAATGGACAAGGCTACTCAAACAAGCTGTCAAACAAGAACAAAAGAGTAGAGAAACTCTTGGGGATTTTGCTGATAACCCTTGATCAACTTGGGTTCGAAATGTTTAGGTGTTATGGTCAGGAAGTTTCTCATTATTTGCATCAAATGTGGCAAAGCTGGCTGTGGAGTTGGAAAAATGAGGGAAACAACTCCCAAAAAGAAGCAGAGCTTTATGTGCAAATCATAAATTTAATGGCTGGCTGTTGGTCAGAAGAACTACAGCTCAATCCTCAGTACCAGAGATTGATGGAAGTCACTAACAGAGTCTGCTATGAACTCCGTAATTACCAAAGCAACAAGGCACATGACAGTGGCAATGGCCACCTGTTTACAACTAGCATCATTACCCCCCAAATAGAATCAGAAATGCAAGAACTTGTGCAATTGGTGCTCCAAAATTCCTCAAATGGCTTGCACTCCAATATCAAGAATTCATTTCTCATAGTGGCCAAGAGTTTCTATTATGCAGCATATTGTGACCCAGAGACAATTAACTCTCATATTGTGAAAGTTCTCTTTCAAAAAGTGATGTAA 2244 0.4095 MISRLSFNPSLTPFARSVVKSCYPFKFFLQSSYDSLGEYVNEVSQDNLPSFEWLEDDIDEEALDQVLVTKEIRKKINAIKLMLGSMEDGEISISAYDTAWIALVKNDEDGNAPQFPSCLEWIANNQLPDGSWGDSEIFVAHDRILNTLACVIALRSWNMHPEKCEKGMQFFTENVYKLQDENAEHMPIGIPREIMHKVSTTLLHSLEGMPDLEWKQLLKLQSQDGSFLFSPSSTAFALMQTKDENALKYLDKTVKLFNGGVPNVYPVDLFEHIWVVDRLERLGISRYFQQEIKSCMSYVSRYWTEKGICWARNSEVQDIDDTAMGFRLLRLHGYHVSPNVFKQFEKSGEFFCIPGQSTQAVTGMFNLYRASQVLFQGEKILEDAKYFSAKFLTEKRAANELLDKWIIAKDLPGEVGYALDVPWYASLPRLETRFYIEQYGGESDVWIGKTLYRMPNVNNEVYLELAKLDYNNCQAVHCTEWEKIQRWHLESELKGFGLSKQSLLFTYFMAAASIFEPERSLERLAWAKTAALLQILKSNIKDEETRSEFADHFNNNINGQGYSNKLSNKNKRVEKLLGILLITLDQLGFEMFRCYGQEVSHYLHQMWQSWLWSWKNEGNNSQKEAELYVQIINLMAGCWSEELQLNPQYQRLMEVTNRVCYELRNYQSNKAHDSGNGHLFTTSIITPQIESEMQELVQLVLQNSSNGLHSNIKNSFLIVAKSFYYAAYCDPETINSHIVKVLFQKVM* 748
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g03002 747 Gene3D - 93 191 - -
Rops8g03002 747 FunFam Ent-copalyl diphosphate synthase, chloroplastic 245 470 - -
Rops8g03002 747 Gene3D Farnesyl Diphosphate Synthase 473 747 IPR008949 -
Rops8g03002 747 SFLD Terpene Cyclase Like 1 N-term - Enzymatic 190 453 - -
Rops8g03002 747 PANTHER ENT-COPALYL DIPHOSPHATE SYNTHASE, CHLOROPLASTIC 190 745 - -
Rops8g03002 747 SUPERFAMILY Terpenoid cyclases/Protein prenyltransferases 224 444 IPR008930 -
Rops8g03002 747 Gene3D - 232 471 IPR036965 GO:0010333|GO:0016829
Rops8g03002 747 Pfam Terpene synthase family, metal binding domain 463 618 IPR005630 GO:0000287|GO:0010333|GO:0016829
Rops8g03002 747 SFLD Terpene Cyclase Like 1 N-term 68 189 - -
Rops8g03002 747 SFLD Terpene Cyclase Like 1 N-term 190 453 - -
Rops8g03002 747 SUPERFAMILY Terpenoid synthases 458 714 IPR008949 -
Rops8g03002 747 Pfam Terpene synthase, N-terminal domain 213 419 IPR001906 GO:0010333|GO:0016829
Rops8g03002 747 SUPERFAMILY Terpenoid cyclases/Protein prenyltransferases 104 239 IPR008930 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g03002 Rops-Chr8 66967753 66976609 Dispersed/Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g03002 K04120 - gmx:100807519 1095.11
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops8g03002 8 66967753 66976609 Rops8g03002 8 66967753 66976609 ECH