Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g02997 ATGAGTGTTCAGCTATCAGGCTTATGGGTGCCCAACTCTCCAGCAATAGTACCTGGACACGTTGTTCCCAATCGTGGCAGATTCTCCCCATCAGCTCTCTCTGCCACACCAACCCAATCTCCCACCATTCAGATAGTTGGTGTGAAAGGTCCTAGTTGGAGTGAAAATGGATATGCCAATCCCAACAGCAACACCTTTGATGGATACCAAGGAGAGAATGCTCATTGGACTGAACTTGACTCTGATCTTTATCACTGGACAAAGATCTTGCGCCCTGTGCAGTGGTTTCCTGGTCATATTGCAAAAGCAGAAAAAGAACTGAAGCAGCAGCTCAAGTTGATGGATGTTGTGATTGAGGTGCGGGATGGTAGAATTCCTATGTCCACAAGTCATCCACAGATGGATCTATGGCTTGGTAATAGAAAGAGAATTTTGGTTTTAAATAGAGAAGATATGATATCAACTGCAGACCGCAATGCTTGGGCAGCATATTTTGCTAGGCTTGGCACAAAGGTTGTCTTCTCCAATGGGCAGCTTGGAATGGGCACAATGAAGCTAGGCCGGTTAGCAAAGGAATTAGCAGCTGATGTAAATGTTAAACGTAGAGCCAAAGGACTACTTCCTCGCCCGGTGGGTTTCTCCAAGCAATTGCAAACCAATTTTGATTCTCTTATGTTCATTTTCTATGTTAATGTAGTGGTTCGAGCTGGAATAGTTGGATACCCTAATGTTGGAAAATCTTCTTTGATCAACCGTTTGTTAAAGCGAAGAATGTGTGCAGCAGCTCCCAGGCCAGGAGTCACAAGAGAATTGAGGTGGGTTCGTTTTGGGAAAGATCTTGAACTGCTGGATTCTCCCGGGATACTACCAATGCGAATCAGTGATCAGTCAGCAGCTATAAAACTTGCCATATGTGATGACATAGGAGAGAGGGCCTATGATGTGGCTGATGTTGCTGCAATTCTTGTGCAGATGCTTACAAAGCTTCCTGTAGTAGGTAGAGATGCTCTCTGTAAACGATACAAGATTGATGTAGATAGTCAATGTGGTAAAATATTCGTGGAGAAGCTTGCGGTCCAAGTATTTAACGGAGATGTTCATCAAGCAGCATTTCGTGTCCTGGCAGATTTTAGAAAAGGTAAGTTTGGTTGGACTGCACTGGAGAGGCCTCCCAGCTTGAACTCGTGTGCCATGGAAATTTGTATGCATCATGCATATGGTGTTGTATATCTTTAA 1236 0.4417 MSVQLSGLWVPNSPAIVPGHVVPNRGRFSPSALSATPTQSPTIQIVGVKGPSWSENGYANPNSNTFDGYQGENAHWTELDSDLYHWTKILRPVQWFPGHIAKAEKELKQQLKLMDVVIEVRDGRIPMSTSHPQMDLWLGNRKRILVLNREDMISTADRNAWAAYFARLGTKVVFSNGQLGMGTMKLGRLAKELAADVNVKRRAKGLLPRPVGFSKQLQTNFDSLMFIFYVNVVVRAGIVGYPNVGKSSLINRLLKRRMCAAAPRPGVTRELRWVRFGKDLELLDSPGILPMRISDQSAAIKLAICDDIGERAYDVADVAAILVQMLTKLPVVGRDALCKRYKIDVDSQCGKIFVEKLAVQVFNGDVHQAAFRVLADFRKGKFGWTALERPPSLNSCAMEICMHHAYGVVYL* 412
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g02997 411 PRINTS GTP1/OBG GTP-binding protein family signature 236 256 IPR006073 GO:0005525
Rops8g02997 411 PRINTS GTP1/OBG GTP-binding protein family signature 282 297 IPR006073 GO:0005525
Rops8g02997 411 Gene3D - 294 382 IPR023179 -
Rops8g02997 411 PANTHER MITOCHONDRIAL RIBOSOME-ASSOCIATED GTPASE 1 81 394 - -
Rops8g02997 411 Pfam 50S ribosome-binding GTPase 236 306 IPR006073 GO:0005525
Rops8g02997 411 FunFam Mitochondrial GTPase 1 294 382 - -
Rops8g02997 411 CDD YlqF 95 289 - -
Rops8g02997 411 Gene3D - 93 289 IPR027417 -
Rops8g02997 411 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 99 357 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g02997 Rops-Chr8 66851294 66856527 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g02997 K19828 - gmx:100784201 639.802