Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g02990 ATGGAAGCAACGCGATTCTCCTCAAATCACTTCCTTCTGCAAAGCTTCCAAACGAAACCAAACGCACTTCAAGGAAGAAGAAGACATGCACAAAGCATTAGGGTTTCCCTTCTCACAATCCCTTTTAGCACAAGGAATTTGGCTTCGCCGAACCGGTCTTTATTTCCGAAGGTGAACCGGAATCTTTCCGTTAACTTCTCCGACCGGCTCAGAAGTGAATACACGCGCGTCGAGTCTCCGTTTTCGAGTGAGGAAATTGTTCAGCCAAGTCTTGGCGGCGACGACGACGGTGAAGCGATTGTTTCGTCTCCGGGTGGTGATGACTCGAGAACCCTAAAGTTCAAACCGAGAACGTACAAGAATAGGTTTCTGAACTTTGTGCGGTTGGGTTCGGTGATTAACGGTGCTGCTGAATCGTTTTTCAAGAGCGAGATTAGGAGGAGGCTGTTCGTGACTGCTGTGCTCATTGTGATAAGTCGTGTTGGTTATTTTATTCCTCTTCCTGGATTTGACAGAAGGTTGATACCGCAAGATTACATGAGCTTTGTTTCAGGATCATCTGTTGATGAACTTGGTGACTTCACCTCTGAGCTCAAGCTATCTCTTTTCCAACTTGGGATCAGTCCTCAGATAATAGCCTCCATTATTATGCAGGTACTCTGTCATGTTGTTCCTTCTCTAGTAAAGCTGCGGAAAGAAGGTCTGGATGGTCATGAGAAGATTAAGAGTTATATATGGTGGATGTCACTTGGTTTTGCAATTTTGGAAGCTCTAATAGTTGCTTGCTACTCACTTCCATATTCAATTTATGCTGCTAGTTATAGGGTGAAACATGTAATGCTGACAACTTTATTGTTGGTATGTGGTGCAATGACAATTACATGGATATGTGATACCATATCAGAATCTGGATTTGGTCAAGGTTCATCTCTTATCATATGTGTGGGAATACTGACGGGTTATATGGAGACATTACACAAAATGCTTACTCAGCTTTCAGTGAGTGCTGTGAGTTGGTGGCCGTATGTGCTTGCTGTATTGGGTATCTTCACTACAGTCACTATGTGGGCAGTTGTAGTAACTGAAGGTTGCAGGAAAGTAAAGCTTCAGTACTATGGTTTTAAACTTGCTTCTGCTGCAAGGGAGCAATCGCCAATTACTGAAGTGGAGCCCTATATTCCTTTCAATATAAATCCAGCTGGGATGCAACCTGTTCTTACCACCTCTTACCTCTTGGCATTTCCTAGCATTCTTGCAAGTCTGCTTGGGTCACCTTTTTGGGAGCGTGTCAAGGAAATATTGAACCCTGAAACTTCTATTGGTGCTGAGCCGTGGGTCTATTATTCCATATATGCCTTTTTTGTCTTCCTTTTCAATATATTTGATATTGCTAACTTGCCAAAGGAAATTGCTGATTACTTAAATAAGATGGGTGCAAGAATACCGAACATAAAGCCTGGGAAGGCTACTATAGAATACCTATCAAAGGTTCAGGCATCCACACGATTTTGGGGGGGCCTATTATTAAGTGTTTTAGCCACTATATCAAGTGTTCTTGACCACTATTTACGGCGTATCAATGCTGGATTTGCTATTGGTTTTACATCGGTTCTAATTATTGTCGGTTCCATTATTGAACTTAGAAGATCCTATGCTGTCATTCCACGGTGCCATTGCCATTTTATTCAAACCTCGAGGATTTGGTCAGCATCGGAAGCTCGGTTTTATTGGGACACTAAATCTAGTTTGTGGGTCTTAGGAGTATCGAGCTCCCGAATCTTAACCCAGTTTTGGCCTAAGGGACCAGTTTTAGATGAACCTATGCAGCTCAGATTTATACCAATGCTGGACCTGACTACAGACAGTGAAACCGTGTGCCCATAA 1884 0.4283 MEATRFSSNHFLLQSFQTKPNALQGRRRHAQSIRVSLLTIPFSTRNLASPNRSLFPKVNRNLSVNFSDRLRSEYTRVESPFSSEEIVQPSLGGDDDGEAIVSSPGGDDSRTLKFKPRTYKNRFLNFVRLGSVINGAAESFFKSEIRRRLFVTAVLIVISRVGYFIPLPGFDRRLIPQDYMSFVSGSSVDELGDFTSELKLSLFQLGISPQIIASIIMQVLCHVVPSLVKLRKEGLDGHEKIKSYIWWMSLGFAILEALIVACYSLPYSIYAASYRVKHVMLTTLLLVCGAMTITWICDTISESGFGQGSSLIICVGILTGYMETLHKMLTQLSVSAVSWWPYVLAVLGIFTTVTMWAVVVTEGCRKVKLQYYGFKLASAAREQSPITEVEPYIPFNINPAGMQPVLTTSYLLAFPSILASLLGSPFWERVKEILNPETSIGAEPWVYYSIYAFFVFLFNIFDIANLPKEIADYLNKMGARIPNIKPGKATIEYLSKVQASTRFWGGLLLSVLATISSVLDHYLRRINAGFAIGFTSVLIIVGSIIELRRSYAVIPRCHCHFIQTSRIWSASEARFYWDTKSSLWVLGVSSSRILTQFWPKGPVLDEPMQLRFIPMLDLTTDSETVCP* 628
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g02990 627 Pfam SecY 201 547 IPR002208 GO:0015031|GO:0016020
Rops8g02990 627 SUPERFAMILY Preprotein translocase SecY subunit 131 549 IPR023201 -
Rops8g02990 627 MobiDBLite consensus disorder prediction 81 111 - -
Rops8g02990 627 Gene3D SecY subunit domain 133 554 IPR023201 -
Rops8g02990 627 PANTHER SECY/SEC61-ALPHA FAMILY MEMBER 139 547 IPR002208 GO:0015031|GO:0016020
Rops8g02990 627 PRINTS Preprotein translocase SecY subunit signature 241 264 - -
Rops8g02990 627 PRINTS Preprotein translocase SecY subunit signature 302 325 - -
Rops8g02990 627 PRINTS Preprotein translocase SecY subunit signature 200 220 - -
Rops8g02990 627 PRINTS Preprotein translocase SecY subunit signature 149 167 - -
Rops8g02990 627 PRINTS Preprotein translocase SecY subunit signature 400 419 - -
Rops8g02990 627 PRINTS Preprotein translocase SecY subunit signature 498 516 - -
Rops8g02990 627 PRINTS Preprotein translocase SecY subunit signature 276 301 - -
Rops8g02990 627 PRINTS Preprotein translocase SecY subunit signature 533 551 - -
Rops8g02990 627 PRINTS Preprotein translocase SecY subunit signature 445 467 - -
Rops8g02990 627 FunFam Preprotein translocase subunit SCY2, chloroplastic 133 556 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops8g02990 52 551 Miscellaneous Gene Families AT2G31530 75.595 0.0 769
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g02990 - - gmx:100803256 914.064
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops8g02990 8 66742302 66749493 Rops8g02990 8 66742302 66749493 ECH