Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g02986 ATGATTGGTTTGTTGTGCTTATGGAATGTTGCTGACAGTGTTCCCAACACCAACATCACCAATGTTCTCTGCAATAGTGGGGAGTACACCTCAGGGGACCCTTTTGCTATTTGTTTAAGCTATGTTCTTGGAGACTTAGAGACAGAAACTCCAGCCCATAAAAATTACGACTACCACAACATTTCACCTTATCCTAATGCCTTTGCCTATGGACATGCTACTTGCAACCTCAATCTAACATCCTCTGACTGCAAAACCTGTCTTGTTGTTGCTAAATCGGCTTTGTTTATCACATGTCAGACATCAAGGATAGGGGCTCGTTCGGTGCTTCATGATTGTACAATTAGGTACGAGCAATACCCATTTGAAGATTAG 375 0.4213 MIGLLCLWNVADSVPNTNITNVLCNSGEYTSGDPFAICLSYVLGDLETETPAHKNYDYHNISPYPNAFAYGHATCNLNLTSSDCKTCLVVAKSALFITCQTSRIGARSVLHDCTIRYEQYPFED* 125
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g02986 124 ProSiteProfiles Gnk2-homologous domain profile. 17 122 IPR002902 -
Rops8g02986 124 Pfam Salt stress response/antifungal 24 120 IPR002902 -
Rops8g02986 124 PANTHER ANTIFUNGAL PROTEIN GINKBILOBIN-2-LIKE 3 122 - -
Rops8g02986 124 FunFam Antifungal protein ginkbilobin-2 16 122 - -
Rops8g02986 124 Gene3D - 16 122 IPR038408 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g02986 Rops-Chr8 66671652 66672026 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops8g02986 70 122 Receptor kinase-like Gene Family AT4G23140 43.396 3.10e-06 43.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g02986 - - gmx:102664018 218.779
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops8g02986 8 66671652 66672026 Rops8g02986 8 66671652 66672026 ECH