Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g02984 ATGAAGCTCGTCAGGTTTCTCATGAAGTTGAACAACGAAACTGTCTCAATCGAGCTCAAGAATGGTACTATTGTCCATGGCACCATTACAGGTGTTGATATAAGTATGAATACACATTTGAAAACAGTTAAACTAACTCTGAAAGGGAAAAACCCGGTTACTTTGGATCATCTCAGTGTGAGAGGCAACAATATTCGTTATTATATTCTTCCTGACAGCTTGAATCTTGAGACTTTACTGGTTGAAGAGACTCCTAGGGTTAAGCCTAAAAAGCCAACTGCTGGTAAGCCTTTGGGGCGAGGGCGGGGAAGAGGACGTGGCCGTGGCCGTGGTCGTGGCCGTTAA 345 0.4435 MKLVRFLMKLNNETVSIELKNGTIVHGTITGVDISMNTHLKTVKLTLKGKNPVTLDHLSVRGNNIRYYILPDSLNLETLLVEETPRVKPKKPTAGKPLGRGRGRGRGRGRGRGR* 115
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g02984 114 Gene3D - 50 82 - -
Rops8g02984 114 Gene3D - 1 49 - -
Rops8g02984 114 MobiDBLite consensus disorder prediction 93 114 - -
Rops8g02984 114 Pfam LSM domain 5 69 IPR001163 -
Rops8g02984 114 PANTHER SMALL NUCLEAR RIBONUCLEOPROTEIN SM 4 113 IPR027141 GO:0006396
Rops8g02984 114 SUPERFAMILY Sm-like ribonucleoproteins 4 113 IPR010920 -
Rops8g02984 114 SMART Sm3 5 70 IPR001163 -
Rops8g02984 114 MobiDBLite consensus disorder prediction 82 114 - -
Rops8g02984 114 ProSiteProfiles Sm domain profile. 2 74 IPR047575 GO:0003723
Rops8g02984 114 FunFam Small nuclear ribonucleoprotein Sm D1 1 82 - -
Rops8g02984 114 CDD Sm_D1 2 93 IPR034102 GO:0000387
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g02984 Rops-Chr8 66606799 66609735 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g02984 K11087 - aew:130756938 196.052
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops8g02984 8 66606799 66609735 Rops8g02984 8 66606799 66609735 ECH