Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g02981 ATGTTCCCTCTGACTCTGAATGCCCTGAACCCTGGTTGGAGGGTGTCCCCACCAGGGAACTTCGTGTACGATGCTGAGGATGTTCCTTTTGGGACACTCTGGTGGTTTGTCTATGCTGGAATTTCTTGTTTACTTGTCCTCTTCGCTGGGATTATGTCTGGTCTCACCCTTGGTTTGATGTCTCTGGGTCTAGTTGACCTTGAGATTTTACAGAGAAGTGGCTCCTCCACTGAGAGAAAACAAGCTGCTGCTATTTTGCCGGTTGTTCAAAAACAGCATCAGTTGCTTGTAACCTTGCTTCTTTGTAACGCTTGTGCCATGGAGGCACTTCCAATTTACCTTGATAAACTTTTTCATCCTGTTGTAGCAGTATTGTTATCAGTAACTTTTGTTCTAGCTTTTGGAGAGGTTATCCCACAAGCTATATGCACAAGATATGGGCTCTATGTTGGTGCAAATTTTGTGGGGCTTGTACGTGTCCTGATGTTCATCTGTTATCCAATTGCTTACCCTATTGGAAAGGTTCTGGATGTTTTACTTGGACACAATGAAGTACTGTTTAGGCGAGCACAATTGAAAGCCCTTGTTTCAATCCATGGCCAAGAGGCTGGTAAAGGAGGTGAACTCACACATGATGAGACAACTATTATCAGCGGAGCACTAGATCTCACTGAGAAGACTGCAGAGGAGGCTATGACACCGATTGAATCAACGTTTTCCTTGGATGTTGCCTCCAAATTGGACTGGGAAGCAATTGGGAAAATTCTTGCACGAGGTCATAGCCGTGTACCAATATATAGTGGAAGCCCCAATAATATAATTGGCCTTTTACTAGTGAAAAGTCTGCTTACTGTAAGAGCTGAAACAGAAACCCCAGTTAGTGCTGTTTATATCCGAAGAATTCCTAGGGTTCCGGCAGATATGCCTTTATATGTTATACTCAAAGAGTTTCAAAAAGGAAGCAGCCATATGGCAGCTGTAGTCAAGGTTATAAGAGAGAGAAACAACCCTCAGCCAATTGGTGACATTGAGAAATCCAACGATAAAGAGGTCACCAAACACAGTTCTCAACTAACTATGCCATTGCTAGCCAAGTCTTCTGATAAATCAGACAATGTTGTTGTCAATATTGACAAGCCTCCTAGACATGTTGCAGACCAACAATGTCAAAAAAATGGCACTGCAACAAATGATGTCCATCACTTTCCTGATAATGATGAAGATGGGGAAGTTATTGGCATCATAACCCTTGAAGATGTTTTTGAAGAAATCCTGCAGGAAGAAATTGTGGATGAGACAGATGTGTATGTAGATGTACATAGAAGAATACGTGTTGCTGCTGTGGCAGCTGCTACATCTGTGGCACTAGTTCCATCTAACCAAAAGTTGACAGGTCATAAGCCTGAAATAAGGGAATCAAGCAAGCAGGTGAAAGTTTGA 1440 0.4257 MFPLTLNALNPGWRVSPPGNFVYDAEDVPFGTLWWFVYAGISCLLVLFAGIMSGLTLGLMSLGLVDLEILQRSGSSTERKQAAAILPVVQKQHQLLVTLLLCNACAMEALPIYLDKLFHPVVAVLLSVTFVLAFGEVIPQAICTRYGLYVGANFVGLVRVLMFICYPIAYPIGKVLDVLLGHNEVLFRRAQLKALVSIHGQEAGKGGELTHDETTIISGALDLTEKTAEEAMTPIESTFSLDVASKLDWEAIGKILARGHSRVPIYSGSPNNIIGLLLVKSLLTVRAETETPVSAVYIRRIPRVPADMPLYVILKEFQKGSSHMAAVVKVIRERNNPQPIGDIEKSNDKEVTKHSSQLTMPLLAKSSDKSDNVVVNIDKPPRHVADQQCQKNGTATNDVHHFPDNDEDGEVIGIITLEDVFEEILQEEIVDETDVYVDVHRRIRVAAVAAATSVALVPSNQKLTGHKPEIRESSKQVKV* 480
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g02981 479 FunFam DUF21 domain-containing protein At4g14240-like 213 350 - -
Rops8g02981 479 ProSiteProfiles CNNM transmembrane domain profile. 31 213 IPR002550 -
Rops8g02981 479 PANTHER METAL TRANSPORTER CNNM 21 449 IPR045095 GO:0010960
Rops8g02981 479 FunFam DUF21 domain-containing protein At5g52790 387 432 - -
Rops8g02981 479 SUPERFAMILY CBS-domain pair 217 426 IPR046342 -
Rops8g02981 479 CDD CBS_pair_CorC_HlyC_assoc 227 328 IPR044751 -
Rops8g02981 479 Pfam Cyclin M transmembrane N-terminal domain 41 212 IPR002550 -
Rops8g02981 479 Gene3D - 344 432 IPR046342 -
Rops8g02981 479 Gene3D - 213 343 IPR046342 -
Rops8g02981 479 ProSiteProfiles CBS domain profile. 367 432 IPR000644 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g02981 Rops-Chr8 66541144 66549731 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g02981 K16302 - gmx:100777230 744.577
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops8g02981 8 66541144 66549731 Rops8g02981 8 66541144 66549731 ECH