Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g02978 ATGGCGACTGTTGCGGATATTTGTACTTCCGCAGCCATTAATCTGTTGTCAGCACTTGCATTCCTGTTGGCATTTGCAGTGTTGCGACTTCAGCCCTTTAACGATAGGGTTTACTTTCCAAAATGGTATCTGAAGGGGATAAGAGGCAGCCCAACAAATTCCAGATCATTTGTGAAGAAATTTGTTAACCTTGATTTTGGGACCTATATCAGGTTTCTGAATTGGATGCCTGCAGCGTTGCATATGCCAGAACCTGAACTTATTGAACATGCAGGGCTTGACTCAGCTGTGTATATTCGGATTTATATCCTTGGAATCAAGATATTTGCCCCAATTACCATACTTGCTTTTATGGTTTTGGTTCCCATTAACTGGACCGCGAAAAATTTGGAAGCACCGAAAGCCAAGGAGTTGACATTTAGTGATATTGACAAGATTTCAATATCAAACATTCCTTTTGGATCAAAGAGGTTTTGGGCGCATATTGCTATGTCATATATCTTCTCATCTTGGACATGCTATAGTCTTTATAAGGAATACAAGATTATAGCGTCAATGAGATTGCGATTTTTGGCAACTGAACGTCGTCGTCCAGACCAATTTACTGTTCTGGTGAGGAATGTTCCCCCGGATCCCGATGAATCAGTCAGTGAGCACATTGAACATTTTTTTTGCGTCAATCATCCTGATCAGTATCTGATGCATCACGTTGTTTATAATGCGAACAAGCTTGCATCAATAGTTGCAAAGAAGAAGAAAATGCAGAACTGGTATACTTACTACCAGAACAAATATGAAAGAGATCCTTCAAACAGACCAGCTACTCGGACAGGTTTTATGGGTCTCTTGGGGACTAAAGTTGATGCTATTGATTACTATACTTCAGTAATTGATAAGTTGAGCGAACAAGAAGCTGCAGAAAGAGAAAATGTGATAGAAGATCCCAGTTCTGTTATCCCTGCAGCATTTGTTTCATTCAAAACCCGATGGGGGGCGGCTGTGTGTGCTCAAACTCAACAAACTAGTAATCCTACTATTTGGCTGACAGAATGGGCTCCTGAGCCTCGTGATGTCTATTGGGAAAATCTCGCAATTCCATATTTTGACCTCAATATTCGAAGATTGCTCATGTCTGTCTCTCTATTTTTCCTTACTTTCTTCTTTATGATACCAATAGCATTGGTCCAATCTCTAGCCAACATTGAGGCAATTGAGAAAGTCCTTCCTTTCTTGAAGCCCATAATCGAAAAGGATTCTGTCAAGTCTGTTATTCAAGGATTTCTGCCAGGGCTAGCATTGAAGATATTTCTTATAATGCTTCCAAAGATTCTCATGACGATGTCCAAAATGGAAGGTTATGCATCGCTTTCAAGTTTGGAACGGAGGTCAGCTTCCAAATATTACATGTTTGTTCTGGTCAATGTGTTCCTTGGGAGCGTTGTAACTGGAACGGCATTTCAGCAACTTAAGCAGTTTGTTGATCAGCCATCTACAGAGTTCACAAAAACTGTTGGCAGTACAATCCCCATGAAAGCCACATTCTTCATCACATACATCATGATCGATGGATGGGCTGGAATAGCTGCAGAGATCCTCAGGTTATCTCCGTTAATTACGTTCCACCTGAAAAACACATTCTTGGTGAAGACGGAGCAAGACAGAGAGAATGCTATGGATCCTGGTAGCTTGGAATTTGCTACATCTGAACCTCGTATCCAGTTATATTTCATGCTGGGGCACGTGTATGCTCCAGTCACACCTTTGCTTCTCCCCTTCATTGTAGTCTTCTTTGCCTTTTCCTACTTGGTCTTTCGGCACCAGATTATCAATGTGTATAACCAGCAATATGAGAGTGGAGCATCGTTTTGGCCAGATATCCACCGTCGAGTAGTTACCGGCTTGATTATATCCCAAATTCTTCTAGCGGGATTGCTAAGTACAAATGGTACAGATAAATTGACCCTATTGCTCGTTGCACAACCTGTCTTGACAATATGGTTCCACAGATATTGCAAAGGGCGTTTTGAATCTGCATTCGTAAAATTCCCACTAGAGGATGCCATGGTGAAGGATACACTTGAAAGGGCTGTGGAACCAAACTTGAACCTGAGACTTTATCTTCAGGATGCATATGTACACCCAGTTTTTAAGGGCAATGAGTTGGAAAGACCAGCGATCATTGATGATGAAGAGGACAATCCACTTATTCAGACAACGAGAGTTTCTCGTCGGAGTAGCAAACCAGAATCTGATAATGAAACCGGCAGTTGCTAA 2274 0.4151 MATVADICTSAAINLLSALAFLLAFAVLRLQPFNDRVYFPKWYLKGIRGSPTNSRSFVKKFVNLDFGTYIRFLNWMPAALHMPEPELIEHAGLDSAVYIRIYILGIKIFAPITILAFMVLVPINWTAKNLEAPKAKELTFSDIDKISISNIPFGSKRFWAHIAMSYIFSSWTCYSLYKEYKIIASMRLRFLATERRRPDQFTVLVRNVPPDPDESVSEHIEHFFCVNHPDQYLMHHVVYNANKLASIVAKKKKMQNWYTYYQNKYERDPSNRPATRTGFMGLLGTKVDAIDYYTSVIDKLSEQEAAERENVIEDPSSVIPAAFVSFKTRWGAAVCAQTQQTSNPTIWLTEWAPEPRDVYWENLAIPYFDLNIRRLLMSVSLFFLTFFFMIPIALVQSLANIEAIEKVLPFLKPIIEKDSVKSVIQGFLPGLALKIFLIMLPKILMTMSKMEGYASLSSLERRSASKYYMFVLVNVFLGSVVTGTAFQQLKQFVDQPSTEFTKTVGSTIPMKATFFITYIMIDGWAGIAAEILRLSPLITFHLKNTFLVKTEQDRENAMDPGSLEFATSEPRIQLYFMLGHVYAPVTPLLLPFIVVFFAFSYLVFRHQIINVYNQQYESGASFWPDIHRRVVTGLIISQILLAGLLSTNGTDKLTLLLVAQPVLTIWFHRYCKGRFESAFVKFPLEDAMVKDTLERAVEPNLNLRLYLQDAYVHPVFKGNELERPAIIDDEEDNPLIQTTRVSRRSSKPESDNETGSC* 758
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g02978 757 PANTHER PROBABLE MEMBRANE PROTEIN DUF221-RELATED 6 720 IPR045122 GO:0005227
Rops8g02978 757 Pfam Cytosolic domain of 10TM putative phosphate transporter 200 362 IPR027815 -
Rops8g02978 757 MobiDBLite consensus disorder prediction 727 757 - -
Rops8g02978 757 Pfam Calcium-dependent channel, 7TM region, putative phosphate 373 645 IPR003864 GO:0016020
Rops8g02978 757 Pfam Late exocytosis, associated with Golgi transport 7 179 IPR032880 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g02978 Rops-Chr8 66468925 66477594 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g02978 K21989 - gmx:100776693 1322.38
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops8g02978 8 66468925 66477594 Rops8g02978 8 66468925 66477594 ECH