Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g02972 ATGTTGTTCTTCTCGTACTTCAAAGATTTGGTGGGTAGAGAAGTAACGGTGGAGCTCAAGAACGATTTGGCCATCAGAGGCACTTTGCATTCCGTTGACCAGTACCTCAATATCAAGCTCGAAAACACTCGCGTTGTCGATCAAGACAAGTACCCCCACATGCTTTCTGTAAGGAATTGCTTCATCAGAGGGTCGGTAGTGAGGTACGTGCAATTGCCTCCAGAAGGGGTGGACGTTGAGCTATTGCATGATGCCACAAGGAGAGAGGCTCGGGCTCAGTTTGACAAACCCAATAGCTTTGCTGTGAGGGTAGAGGTGGAGGAAGAAGAAGAGGAGGCAACGGTGGTGCAAAGGTGGCATGGTGGAGGTGAAGAGAAGGTGGAGAAAAGAGCCTCACCGGAGAGAGGTGGTGTTCAGAGTGGAAGGAGCCGGAGAGAGAGGCGGTGA 447 0.5123 MLFFSYFKDLVGREVTVELKNDLAIRGTLHSVDQYLNIKLENTRVVDQDKYPHMLSVRNCFIRGSVVRYVQLPPEGVDVELLHDATRREARAQFDKPNSFAVRVEVEEEEEEATVVQRWHGGGEEKVEKRASPERGGVQSGRSRRERR* 149
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g02972 148 FunFam U6 snRNA-associated Sm-like protein LSm2 1 95 - -
Rops8g02972 148 Gene3D - 1 95 - -
Rops8g02972 148 ProSiteProfiles Sm domain profile. 2 76 IPR047575 GO:0003723
Rops8g02972 148 MobiDBLite consensus disorder prediction 113 148 - -
Rops8g02972 148 SUPERFAMILY Sm-like ribonucleoproteins 3 97 IPR010920 -
Rops8g02972 148 SMART Sm3 5 72 IPR001163 -
Rops8g02972 148 CDD LSm2 2 90 IPR016654 GO:0006397
Rops8g02972 148 PANTHER SNRNP CORE PROTEIN FAMILY MEMBER 1 93 IPR016654 GO:0006397
Rops8g02972 148 Pfam LSM domain 7 71 IPR001163 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g02972 K12621 - jre:109004791 184.882
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops8g02972 8 66428734 66432722 Rops8g02972 8 66428734 66432722 ECH