Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g02960 ATGAGAGAGATACAGTTACCATTGAGCCAAACTCAGAAGCTTCGTCTTCAGAAGGCTCTGGAACAGCTCGAATCTCTATCATCGAAGGTGAATTCCGATGCTTCGGTAACCATCGCCGATTCCATCCCTGTGAACCACGAAGACGGCGTTCTCAAGGGACACGGAACCTCCGACCTTAACGGAGAAGTAGTTTCCACCGTCTGCGGCATCGTCGAGCGTGTTAACAAGCTCGTCTATGTCCGTGCCTTGCGTTCCAGGTACAAGCCTGAGGTTGGTGACATCGTGATAGGGCGTGTTGTTGAGGTTGCTCAGAAGCGTTGGAGATTGGATATAAATTACAGTCAAGATGCTGTTTTGATGCTTTCTTCTATGAATATGCCTGATGGTGTTCAGAGACGAAGGACATCTGTAGATGAGCTAAACATGCGCTTGATTTTTGAGGAGAAGGATGTTGTTTGTGCTGAAGTTCGTGGTTTCCAGCATGACGGCTTACACCTTCAAGCTAGAAGTCAGAAATATGGAAAGCTTAATAGAGGTCAACTGCTAAAAGTCCCTCCATATTTAGTGAAGAGACAAAAACAACATTTCCATCATCTAGAGCAGTATGGTATTGATTTGATACTTGGCTGTAATGGATTCATTTGGGTTGGGGAACATATTGAAACCAGAGCTGACATGGTAGAAGATCAAGTGAACCAATCTGATCCACAAGTTTTATTGCCCAATAAAAATTCTGAGAGTGTTGAAGAACAAGAGAAAAATTACACGATGTTGGAGACAAGAAAATACATATGCATGGCTGCTAATGCTGTTAGAGTATTATCGACTTTGGGTTTCAATATTACGATGGAAATCATCAAGGGAATTATTGAGCTAAGCCTTTCTCTGAATCTTGATATACATGATATGCTTGGTTCTGAATTCTGTGTTCTGGTTGCCGAAAAAGAGGTAGAAAGGAGAAGCTCCAATAAAAAGAAGCGGTAG 984 0.4258 MREIQLPLSQTQKLRLQKALEQLESLSSKVNSDASVTIADSIPVNHEDGVLKGHGTSDLNGEVVSTVCGIVERVNKLVYVRALRSRYKPEVGDIVIGRVVEVAQKRWRLDINYSQDAVLMLSSMNMPDGVQRRRTSVDELNMRLIFEEKDVVCAEVRGFQHDGLHLQARSQKYGKLNRGQLLKVPPYLVKRQKQHFHHLEQYGIDLILGCNGFIWVGEHIETRADMVEDQVNQSDPQVLLPNKNSESVEEQEKNYTMLETRKYICMAANAVRVLSTLGFNITMEIIKGIIELSLSLNLDIHDMLGSEFCVLVAEKEVERRSSNKKKR* 328
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g02960 327 Pfam KH domain 179 219 IPR004088 GO:0003723
Rops8g02960 327 Gene3D - 36 87 - -
Rops8g02960 327 SMART S1_6 90 169 IPR022967 -
Rops8g02960 327 Coils Coil 9 29 - -
Rops8g02960 327 Gene3D - 88 177 IPR012340 -
Rops8g02960 327 PANTHER PNAS-3 RELATED 32 319 IPR026699 GO:0000178|GO:0003723
Rops8g02960 327 SUPERFAMILY Eukaryotic type KH-domain (KH-domain type I) 179 322 IPR036612 GO:0003723
Rops8g02960 327 SUPERFAMILY Nucleic acid-binding proteins 85 176 IPR012340 -
Rops8g02960 327 SUPERFAMILY Ribosomal L27 protein-like 44 82 - -
Rops8g02960 327 CDD KH-I_Rrp4_eukar 179 317 - -
Rops8g02960 327 FunFam Exosome complex component RRP4 87 177 - -
Rops8g02960 327 CDD S1_Rrp4 86 176 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g02960 K03679 - gmx:100776358 581.252
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops8g02960 8 66317638 66320697 Rops8g02960 8 66317638 66320697 ECH