Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g02957 ATGGAGAAGCTGGAAGAGTCAACCAGGAATGCACAGCATCACCAGTTGGAGACTCTTCGTTCAATCCTTCTTCACAATGGTTGTGTGAGCTATCTCCAATCCTTCAATGCCAAAGGGGTCACTCTTGATCCTCTTACTTTCAAACGTGTGGTGCCCTTGTCTTCCTACGAGGATTATGTTGAGTATATCAACCACATGGCAGATGGGAATAAAGACCCTCTTCTCTCTGCTGATCCTCTCATCTGTTTCTTCTACAGCTCCGGAACAAGCTCCATGAAACCGAAATTGATTCCTTACTATGATTCAAGTCTTTCCAAAGCTGCCTCCTTTATTGGTCACCGAGGCAGTGTTGCTGTTCTTCAGAGGCTGTTTCCTCCAAGGCCCGATGTCAACAAGATCCTATGGTTTCTCTATGCTGACAATATTACTACTACTAAATGTGGCTTGAAGGTTATGGCTGCCTCTTCATACCTTTTGCAAAGTGTTAAGGCCACCTCTCAGCAACTTGCTACCTTTTCCAGTCCCTTTGAAGTTTTTCTTGGATCTCATGTTGAGCATCAAATGTATTGCCACCTTCTCTGTGGCCTTAGGAATATGGATGTTATAGATGGAATTAGTACCCCTTATGCCATAGGCTTGATTAAAGCATTTGGTCTTCTGGAGTCCAAGTGGGAGCAGCTATGTGATGATCTTGAACGTGGGTTTCCTAGTGATGAAATTTCAGAGGTGGCAATGAGGGAAGCTGTAACCAACAAACTTGGTGGACCTCAGCCAGAATTGTCAAATGGAATAAGGTTAGTTTGTGAAGGTAAGAACTGGGGTGGGATTGTACATAGATTGTGGCCAAACATTCGTTTTATCAGGTGTGTTACCACCGGAAGCATGAAGCAGTACTACCAAAAGCTTAAGTATTATGCAGGAGAGGTACCTATTGTAGGAGGAGATTACTTTGCCTCAGAGTGCTGTGTGGGTATAAATTTAGACATAATGCAACCCCCAGAGACAACTAGATTTGTAATACTTCCTACTGCTGCATACTTTGAGTTTCTCCCATTTAACATGAAAGAAGACAATGGTGTTGGTGAAGTAACAGTGGACCTTGGCAGTGTAGAGGTTGGGAAGATGTATGAAGTGGTTGTTACTACTCATAGAGGATTTTATCGATACCGACTGGGAGATATAGTGAGAGTTGTTGGTTTCCATAACTCATCCCCACAAGTGGAATATGTGATGAGGGCACCTAAAACTCCTGCAGAGATTCTGACCGAGAAAGACTTGATTTCAGCAGTTGAAAGTTTTCAACTTGCACTAAGAGGTGTTATGAGAATTGAGATTGTTGAGTTTGCAAGTTTCTTGGATCAGGAGTCAACGCCAAAGCAGATGAAGGTGTTTGTAGAAGTCCAGGAGGAATCTAATTTTCTGGAGGAGGAAGTAGTTGCAAATTATAGAAGTTGTATTTCCTCTCTAGAAAATGGCTTGGGAGCTCTGTACAAGGTGCAGAGAGATAAAGGTCATCTAGGGAATTTACTGATATTCATCCTAAGGCCTGGAGCTTTCGATCAGTTATCAGAATTAGCCTTTAAGAATGGAACATCAGCTAGTCAATATAAACCACCCAAGATTATACGGAATCATGAAGCTGTCAAATTCTTGGAACAATTAGCTTTTGTGACAGTATCACTGGATGACCAATAA 1695 0.4224 MEKLEESTRNAQHHQLETLRSILLHNGCVSYLQSFNAKGVTLDPLTFKRVVPLSSYEDYVEYINHMADGNKDPLLSADPLICFFYSSGTSSMKPKLIPYYDSSLSKAASFIGHRGSVAVLQRLFPPRPDVNKILWFLYADNITTTKCGLKVMAASSYLLQSVKATSQQLATFSSPFEVFLGSHVEHQMYCHLLCGLRNMDVIDGISTPYAIGLIKAFGLLESKWEQLCDDLERGFPSDEISEVAMREAVTNKLGGPQPELSNGIRLVCEGKNWGGIVHRLWPNIRFIRCVTTGSMKQYYQKLKYYAGEVPIVGGDYFASECCVGINLDIMQPPETTRFVILPTAAYFEFLPFNMKEDNGVGEVTVDLGSVEVGKMYEVVVTTHRGFYRYRLGDIVRVVGFHNSSPQVEYVMRAPKTPAEILTEKDLISAVESFQLALRGVMRIEIVEFASFLDQESTPKQMKVFVEVQEESNFLEEEVVANYRSCISSLENGLGALYKVQRDKGHLGNLLIFILRPGAFDQLSELAFKNGTSASQYKPPKIIRNHEAVKFLEQLAFVTVSLDDQ* 565
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g02957 564 PANTHER GH3 DOMAIN-CONTAINING PROTEIN 1 554 IPR004993 -
Rops8g02957 564 Pfam GH3 auxin-responsive promoter 3 545 IPR004993 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g02957 Rops-Chr8 66273090 66275277 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops8g02957 1 558 EF-hand Containing Proteins AT1G23160 32.292 4.37e-94 297
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g02957 K14487 - gmx:100786829 926.391
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops8g02957 8 66273090 66275277 Rops8g02957 8 66273090 66275277 ECH