Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g02933 ATGTCTGGAAAAGCATCAACTTCAAAGCCTAATATAGGTCTGAGTGGATCTGATGGTCTTTCACATGCCTACATTCAGTATCCACCACTTCGGTGCAATGTTCCTGGATCAAGGGGATTATTTTATGATGATGGAAATAAGTTGCTACTCTCCCCAACAGCGGACATGGTCTTTTCATGGAAAGTCAGTCCCTTTGATCCTCTGGTTGGTCCCACCTCTGATTCAATAAGTGAAGGCCCTATTATAGCAATTCGGTACTCTTTAGACACAAAGGTTATAGCAATCCAACGATCAAACCATGAGATGCAGTTTTGGGATAGAGAGACTGGGGAAACATTTATCCATAAATGCAGGCCAGAATCAGAAAGTATACTTGGATTTTTTTGGAGTGATAGTCAACAATGTGATATTGTTATTGTTAAGACCAATGGTCTAGACTTGTATGCATATAAATCAGAATCAAAATCACTGCAATTGGTGGAAACAAAGAAATTGAATGTGAGTTGGTATGTTTACACACATGAAAGTCGCTTGGTTCTTCTTGCTTATGGAATGCAGTGCAAGACATTTCATGGATTTCAGATTTCATCTGCAGATATTGTTCGTTTGCCAAGGTTTGAGATGGTTATGGCCAAATCTGAGGCAAATAGTAAGCCCGTTTTAGCAGCTGAAGACATCTTTATTGTCACTGTTTATGGTAGGATATACTGCTTGCAAGTTGATAGAGTTGCAATGCTACTCCATTCGTATAGGCTATATCGAGATGCAGTGATACAGCAGGGTTCTTTACCAATTTATTCCAGCAGGATTGCTGTGAGTGTGGTCGACAATGTACTTCTTATTCATCAAGTTGATGCAAAGGTTGTTATACTTTATGATCTCTTTGCAGATTCTCGAGCACCAATATCTGCACCTCTTCCTTTATTATTAAGGGGTTTCCCCAGGTCTGGTACTTCGTCTCAATCTAGTGGTAGAGAAAGTGAGAGTTCAGATGGTAATGTTGTAGCAGTTACTTACGCTGATACATGGACTTTTCTAGTGCCTGACCTCGTATGCGATGTGGCCAATAAGTTACTATGGAAATTCAATTTAGACTTAGACGCAATTTCTGCCAGTAACTCAGAGGTCCCATCAGTATTAGAGTTCCTGCAGCGGCGGAAGTTGGAAGCAAACAAGGCTAAACAATTGTGCTTGGGTATAACACGGACTCTTATTCTAGAGCATAGGCCTGTGTCTGTTGTTGCCAAGGCTATAAATGTGCTAGTCACCTCGTACTCCCATTCAATTAAAACTGGTGGCTATCTTAAGGGACTGAAACCAGAGAAAACCTCAACTTCTGGTGTACAAAATGCTGGTGCTGATGTATCTGCTATAGAATCAAATGCAATTGGAAAATCGATCATACATGAATCTACCACAAGAGTAGACGGTGGATCCTTAAATAACACTTCAACTGTTTCAAATTTGGATTCTGAGGATGATTCGCAGTCTGCAAATCCTAAACGCACTCCAAAGGAGGCCCAAGTTGGGGGTAACGTAAACAAGGAGAACTCCCTGAGTACTGAAGCTCATAGTGCTCATGTTATGCAATCATCTTTGCAGTCTGGGCATGAGGAATCCCAACTTACTTCTGCAGCAATTTCACCAGATGAGATGTACAGCTTTGTCTTTTCTCCTGTTGATGAAGAGATGGTTGGAGACCCTTCTTACTTGGTTGCAATCATTATTGAGTACCTTTACAGTGCAAATTTGGAAAAGATTCGTGTACTCCCCAATCTATATGTATTGATAATTCAACTTTTGGCTCGCAATGAACGTCATGCAGAACTCGGGTTGTTTGTCATAAACAAGATTCTGGAGCCCTCTAAGGAAGTTGCACTACAACTCCTAGAGTCTGGTCGTCAGAATGCCCAAACTAGGAAGCTTGGTCTGGATATGTTGAGACAGCTTGGTTTACATCATGATTATGTATTGCTGCTAGTGCAAGATGGATACTACCTTGAAGCCTTACGATATGAACGGAAGTATAGGGTGGATACCATCCGGCCATCATTGTTCTTAGAAGCAGCATTTGTTTCCAATGACTCCCAACATCTTGCTGCAGTTCTAAGATTCTTCTCAGATTTCCTTCCTGGCTTCAGAAACACCTCAGACCATAATAGATACTATCGCATACTGAATGAGATGAACTCATCCATGACTGTTTGA 2208 0.4108 MSGKASTSKPNIGLSGSDGLSHAYIQYPPLRCNVPGSRGLFYDDGNKLLLSPTADMVFSWKVSPFDPLVGPTSDSISEGPIIAIRYSLDTKVIAIQRSNHEMQFWDRETGETFIHKCRPESESILGFFWSDSQQCDIVIVKTNGLDLYAYKSESKSLQLVETKKLNVSWYVYTHESRLVLLAYGMQCKTFHGFQISSADIVRLPRFEMVMAKSEANSKPVLAAEDIFIVTVYGRIYCLQVDRVAMLLHSYRLYRDAVIQQGSLPIYSSRIAVSVVDNVLLIHQVDAKVVILYDLFADSRAPISAPLPLLLRGFPRSGTSSQSSGRESESSDGNVVAVTYADTWTFLVPDLVCDVANKLLWKFNLDLDAISASNSEVPSVLEFLQRRKLEANKAKQLCLGITRTLILEHRPVSVVAKAINVLVTSYSHSIKTGGYLKGLKPEKTSTSGVQNAGADVSAIESNAIGKSIIHESTTRVDGGSLNNTSTVSNLDSEDDSQSANPKRTPKEAQVGGNVNKENSLSTEAHSAHVMQSSLQSGHEESQLTSAAISPDEMYSFVFSPVDEEMVGDPSYLVAIIIEYLYSANLEKIRVLPNLYVLIIQLLARNERHAELGLFVINKILEPSKEVALQLLESGRQNAQTRKLGLDMLRQLGLHHDYVLLLVQDGYYLEALRYERKYRVDTIRPSLFLEAAFVSNDSQHLAAVLRFFSDFLPGFRNTSDHNRYYRILNEMNSSMTV* 736
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g02933 735 MobiDBLite consensus disorder prediction 473 513 - -
Rops8g02933 735 MobiDBLite consensus disorder prediction 473 494 - -
Rops8g02933 735 PANTHER COLON CANCER-ASSOCIATED PROTEIN MIC1 19 730 IPR040371 GO:0010506|GO:0035658
Rops8g02933 735 Pfam Colon cancer-associated protein Mic1-like 568 708 IPR009755 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g02933 Rops-Chr8 65599150 65619086 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g02933 K24763 - gmx:100500389 1281.54
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops8g02933 8 65599150 65619086 Rops8g02933 8 65599150 65619086 ECH