Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g02924 ATGGACGAAGAAGAAGAACAACAGAAGCTTCCAGATCTAGTGAAAGAACTAGTCCACCGCTTATTAAGTCAAAACCTTCCCCCAAATTCCCCACCCTTAAACCCTAACTCCCCCGAATTCCAAAACTCCCTCCGTTACGCCCTCCGCATTCTTTCAAGCCGCCTCACTCCCTCCGTCTCCCCCGATGCCGCCGCCATCGCCGAATCCATCAAACGCCGCCTCGCCACTCAAGGCCGTTCCTCCGAAGCCCTCTCCTTCGCCGACCTCTACACCAAATTCGCTTCCAAAGCCACCAGTGTAAACAACAAATGGGCCCTCCTTTACCTCCTCAAAATCATCTCCCAAGATCGCAAGTCCCAATCCGATTCCTTTTCTTCCCTTCTCCTCCCCAACCTCCCCACTCCCTCACACCAACATGACAACAACAACAACAAGCCTTGGAACGACGGCGTTTTGCTCATTTCTAAAGATCCTGAGAATCGCCGTGATATCGCGTTTCGTGAGTTCATGAATTTGGTAAAGGAAGAGTCCGAGGTCTCTGAGGAGGTTTTGGTAAAAGACGTGCTCTATGCCTGTCAAGGAGTTGATGGTAAGTATGTGAAATTCGAGAGTGAGAAAAATGGTTATGTTTTATCGGATTCGATTAGGGTTCCTAGAGCTACTAGGAGTATGGTTCATAAGCTTTGTGAATTGGGGTTTTTGTTTAAGAAGGTTACAAGATATATATGGAATAGTATGGATCGGTTTCCTGCGGAAGATGTGGGAACTGTTGGGCAAGCTTTTTGTTCTGCTTTGCAAGATGAGTTGAGTGAGTATTACAAGTTGTTGGCAGTGCTTGAGGCTCAGTCTTCCAATCCAATTCCTTTGGTTTCGGAATCTGCGAGTTCGGGGAATTATCTTTCATTGAGGAGATTGGCTGTTTGGCTCGCGGAGCCAATGGTGAAGATGAGGTTGATGGGTGATTTGGTTGATAAATGTAGGGTTTTGCGTGGTGGGGCAATGGCTGGTGCTATTCATTTGCACGTACAACATGGTGATCCGTTGGTTCAGGAGTTCATGAAGAGATTGTTGCAGCGTGTGTGTTCTTCGTTGTTTGAGATGGTGAGAAGGTGGGTTCTTGAAGGGGAATTGGAAGATATCTTTGCAGAGTTTTTCATTGTTGGGCAACCGGTGAAAGCTGAATCCCTTTGGAGAGAAGGGTATAGACTCCATCATGCGATGCTTCCTTCCTTCATTTCGCCTTCTCTTGCTCAGAGGATATTGAGGACCGGAAAGTCTATAAATTTTCTTCGAGTTTGCTGTGAGGATCGCGGTTGGGCTCATGCCGCTAATGATGTTGTCACTGATACGGGGGCCAAGGCAAGAAGAGGCGGTTTTGGTTATGGTGAAACCGATACCCTCGAGTCCTTGGTTGATGAAGCTGCGAAAAGAATTGACAAGCATCTGTTGGATGTGATTTACAAGAGGTACAAGTTCAAAGAACACTGTCTTGCAATTAAGCAGTATTTATTGCTTGGCCAAGGTGATTTTGTGCAATATCTGATGGATATTGTTGGGCCTGAACTTTCTGAGCCAGCTAACACCATAAGCTCTTTCAAACTTTCGGGATTGCTGGAAACTGCAATTCGGGCATCCAATGCTCAATATGATGATCCTGACATTTTGGATAGGCTCAGGGTCAAAATGATGCCACATGAAAGTGGTGATAGGGGCTGGGATGTATTTTCACTAGAATATGATGCAAGAGTTCCACTAGATACCGTGTTCACAGAGTCTGTGATGGCAAGGTATTTAAGAATTTTCAATTTTCTGTGGAAGCTTAAAAGAGTGGAACACGCACTTATTGGTGCATGGAAAACCATGAAACCAAACTGTATTACCTCTAATTCCTATACCAGACTGCAACACGCAGTAAAGATGCAGCTAGTGTCGACCTTGAGGCGCTGCCAGGTTCTTTGGGTTGAAATTAATCACTTTATTTCAAACTTGCAATACTATATAATGTTTGAAGTCTTGGAGGTATCATGGTCAAACCTTTTAAGTGAGATGGAAGTAGCCAAGGATCTTGACGATCTACTTGCAGCTCATGAGAAATATCTGCATTCAGTTATAGAGAAATCTCTTCTTGGAGAGCTCTCCCAGTCCCTTTACAAATCACTATTAGTAATATTTGATCTTATACTTCGTTTTCGGAGCCATGCGGATCGGTTGTATGAAGGTATTCATGAGTTGCAATCAAGAATCACAGAATCCTCCCTATCCTCTCGAGACCAGAATATATCACGGAGGCAAATGAATGATAAGTCTGGGGAACAAGGATCCTGGATTGCTGAAGGTAGGAAAGCCCTAACACAACGTGCTGGTGAATTTCTTCGAAATATGGGACAAGATCTGGATGCAATTGCTGAGGAGTACTCATCATTGCAAGAGGAATTCATTTCCCAGTTACCTGTACAGCAGCATGTTGATCTAAAGTTTCTCTTTTTCCGCCTGGACTTCAATGAATTTTATAGACGGTTGTGCCAACCATTTCATGAGTCATTAATTGACTATAGGCAGTCATCTTTTGTGGTTTGCAAGGTAGTTTGTGGCAGATGTGAAGCTATTGATATTCTTATTGGATGCATGATACTGCTTGAATTTTTGCCTCGTGGTAATAAAAATAAAGCCACAGGTGAATCAAGTATCGAGATGCTTGCCTTGCCATTCACTATACTATATACTTCTTCATTCAATATACTTTATACACATCTAAGTGATATTCTTTCTAACTTGGGCTAG 2781 0.4373 MDEEEEQQKLPDLVKELVHRLLSQNLPPNSPPLNPNSPEFQNSLRYALRILSSRLTPSVSPDAAAIAESIKRRLATQGRSSEALSFADLYTKFASKATSVNNKWALLYLLKIISQDRKSQSDSFSSLLLPNLPTPSHQHDNNNNKPWNDGVLLISKDPENRRDIAFREFMNLVKEESEVSEEVLVKDVLYACQGVDGKYVKFESEKNGYVLSDSIRVPRATRSMVHKLCELGFLFKKVTRYIWNSMDRFPAEDVGTVGQAFCSALQDELSEYYKLLAVLEAQSSNPIPLVSESASSGNYLSLRRLAVWLAEPMVKMRLMGDLVDKCRVLRGGAMAGAIHLHVQHGDPLVQEFMKRLLQRVCSSLFEMVRRWVLEGELEDIFAEFFIVGQPVKAESLWREGYRLHHAMLPSFISPSLAQRILRTGKSINFLRVCCEDRGWAHAANDVVTDTGAKARRGGFGYGETDTLESLVDEAAKRIDKHLLDVIYKRYKFKEHCLAIKQYLLLGQGDFVQYLMDIVGPELSEPANTISSFKLSGLLETAIRASNAQYDDPDILDRLRVKMMPHESGDRGWDVFSLEYDARVPLDTVFTESVMARYLRIFNFLWKLKRVEHALIGAWKTMKPNCITSNSYTRLQHAVKMQLVSTLRRCQVLWVEINHFISNLQYYIMFEVLEVSWSNLLSEMEVAKDLDDLLAAHEKYLHSVIEKSLLGELSQSLYKSLLVIFDLILRFRSHADRLYEGIHELQSRITESSLSSRDQNISRRQMNDKSGEQGSWIAEGRKALTQRAGEFLRNMGQDLDAIAEEYSSLQEEFISQLPVQQHVDLKFLFFRLDFNEFYRRLCQPFHESLIDYRQSSFVVCKVVCGRCEAIDILIGCMILLEFLPRGNKNKATGESSIEMLALPFTILYTSSFNILYTHLSDILSNLG* 927
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g02924 926 Coils Coil 262 282 - -
Rops8g02924 926 Pfam Gamma tubulin complex component N-terminal 185 488 IPR041470 -
Rops8g02924 926 Pfam Gamma tubulin complex component C-terminal 494 837 IPR040457 GO:0043015
Rops8g02924 926 PANTHER GAMMA TUBULIN COMPLEX PROTEIN 10 837 IPR007259 GO:0000226|GO:0000922|GO:0005815|GO:0007020|GO:0043015
Rops8g02924 926 Gene3D - 493 836 IPR042241 -
Rops8g02924 926 Coils Coil 791 811 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g02924 Rops-Chr8 65433642 65437545 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g02924 K16570 - gmx:100784710 1428.69
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops8g02924 8 65433642 65437545 Rops8g02924 8 65433642 65437545 ECH