Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g02922 ATGGCGAAGTACGGCGAGGGCGATAAACGTTGGATCGTGGAAGACAGAGCTGACGGCACCAACGTCCACAACTGGCACTGGGCCGAAACTAACTGTCTCGAATGGTCTAGAACCTTCTTTAACAACCTCCTCAGCAACCTAACGGTTCTTGACGGCGAGGGTTACCTTTTCATCAAAACCACCACTCTCCGCAACCTCGACGGCGAGGCTTACATCAACGTCCGAAAGGGAAAGATCATCCCTGGCTACGAGATCAACCTCACTTTAGCCTGGGAAGGTGAGGCTAAAGATCCACAGGGAAGTTCGTTGCTCAAAGTTAACGGCACCGTTGAAATCCCTTACATCTCTGACGAGAACGCCGATGAGGATCCTGAACTTAGGGTCACCGTCGATGATGAAGGACCTATCGGGAAGAGGCTCAAGGATGCGATGATTTCGAAAGGGAAGCCGTTGATTTTGGAGAAGGTTAAGGTTTGGGTGGAAAGCATGGCCAAAGGTGGTCCTGTCAAGGACGAATTGGATAATAACAATAACAATAACAACAAGAAGGTCTCGTCCTCGCCGGCGCCGCCGCAGAATCATGCTCTCACGGCGACGCAGACGGTGGCTTCACCGGTTGTTAAAAAGGTTGGTTCGGCGGAGAAGGAGAGCAAGAAAGGACGGAAAAGTATTAGATTGACGGAGAGGTTTAGTTGCAGGGCGAGGGATTTGTATGAGATTTTGATGGATGAGAATAGGTGGAAGGGTTTTACGCAGAGCAATGCTAGGATAAGTAAGGAGGTTGGTGGTGAGTTTAGTATTTTTGATGGGTCGGTTACTGGAACTAATTTGGAGTTGCAGGAAGCTAAGTTGATTGTGCAGATATGGAGGTTTGGGAGTTGGAATGATGGGGTTCAATCTCAGGTGAGGCTTGTTTTTGAGGAGCCTGAACCTGGAGTTACTGTTGTTAAGCTCACTCATACTGATGTGCCTGAAGAAGATAGGTATGGGAATGCTACTGTGGTTGAGAACACTGAAAGGGGATGGAGGGATCTTATTTTCCAAAGGATAAGTGCAGTTTTTGGTTTTGGAATTTAA 1077 0.481 MAKYGEGDKRWIVEDRADGTNVHNWHWAETNCLEWSRTFFNNLLSNLTVLDGEGYLFIKTTTLRNLDGEAYINVRKGKIIPGYEINLTLAWEGEAKDPQGSSLLKVNGTVEIPYISDENADEDPELRVTVDDEGPIGKRLKDAMISKGKPLILEKVKVWVESMAKGGPVKDELDNNNNNNNKKVSSSPAPPQNHALTATQTVASPVVKKVGSAEKESKKGRKSIRLTERFSCRARDLYEILMDENRWKGFTQSNARISKEVGGEFSIFDGSVTGTNLELQEAKLIVQIWRFGSWNDGVQSQVRLVFEEPEPGVTVVKLTHTDVPEEDRYGNATVVENTERGWRDLIFQRISAVFGFGI* 359
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g02922 358 CDD SRPBCC_Aha1 223 356 - -
Rops8g02922 358 Pfam Activator of Hsp90 ATPase, N-terminal 29 165 IPR015310 GO:0001671|GO:0051087
Rops8g02922 358 Gene3D - 18 178 IPR036338 -
Rops8g02922 358 PANTHER HEAT SHOCK PROTEIN 90 HSP90 CO-CHAPERONE AHA-1 1 164 IPR015310 GO:0001671|GO:0051087
Rops8g02922 358 SUPERFAMILY Bet v1-like 223 357 - -
Rops8g02922 358 MobiDBLite consensus disorder prediction 172 203 - -
Rops8g02922 358 MobiDBLite consensus disorder prediction 167 203 - -
Rops8g02922 358 SMART Aha1_N_2 29 165 IPR015310 GO:0001671|GO:0051087
Rops8g02922 358 Pfam Activator of Hsp90 ATPase homolog 1-like protein 234 353 IPR013538 -
Rops8g02922 358 Gene3D - 221 357 IPR023393 -
Rops8g02922 358 SUPERFAMILY Activator of Hsp90 ATPase, Aha1 20 165 IPR036338 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g02922 Rops-Chr8 65423935 65425636 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g02922 K26216 - gmx:100812897 592.038
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops8g02922 8 65423935 65425636 Rops8g02922 8 65423935 65425636 ECH
Rops8g02922 8 65423935 65425636 Rops6g00706 6 18113676 18115559 PCT