Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g02910 ATGGCTGCATCTGCATATATATCATCATCATCACTATACCAAGCAAAGCAAGACCCTTTGTTTCTTCTTTCTAGTTTCTCCTTTGGAGGCATCTTTGGTGTGGGTGAGAGAAACGCGTATCAGGTTCACATGGCTGCTTTGCTTTCTTTCTGTCTGATTGCACGCCCAACATACAACACGATACGGGTCGCTCTCACCTGCACCATAGCTGCCCAAAACTTTGTTATTCATCAAAAACTACCATTTCCATCATCAATTATATATCCCTGCCCTTCTCCGGTCCATTCCCACCCACTGCTGTTGAAGGAAGATCAGAAAAATGAAGAACAGCAAGTCTTTTGCTCAGGTTGTGAAAAACCAATTTCAGGTCCTGTCTTCTGCTGTGACCATTGCAACTATGTCCTACACAAATCATGTGCTGAACTTCCACGCCAAATGAAACACCCCTTTCACCCTCAACATGTCCTTCAACTCCTTTCCACCTCCCCTTACAAAGGAAGGTACATATGCAATGCATGCAGAGGTTTATTCAACAAATTCGTATACCATTGTTATATTTGCCAATATGACCTTGACATGGCATGTGCTTCTCGATTGCGCCCTGATGATGGCCATAGTCATGTTTTTATTTCATTGACTTATCTAACACCGTTTTATTGCTATGCATGTGGTGAGCAAGCAGATGAGAACCTCTCATGTTTATGCACCATTTGTCAGATTCGGGTTCATTCTAGCTGTGCTGAATTGCCTCAGGATATAAGAATAAATTGTCACCATCACCGTTTGAAGCTTAATTACACCCTTCATCATGTTTATGGTTTCGGGGTGGACCTAACTTGTGGTGCTTGTAATGAAAAAATGAGCTCTACTTTTGCAGGTTATTTTTGTTCATCTTGTGAATATCCTGTACATTTGAAGTGTGCACAACAACATTTGATAGATGATTATTGTGAGACAGAAACAGAAGGTGAAGAATTGAAAACTGATGAGTTTCAATATCTTGGATTCAGTTTATTCAGTCATGACCATTTGTTGAAGTTCATGGAGGAACAGAGTTTGGAATATGTTGATAAACTATGTGATGGGTGTATCCAACCCATAACGCCACCCTTCTTTTCTTGTTCTAAAAATTGTGGTTTTCTTCTTCACCAAAGTTGTGCTGAATTACCAAGAACAAAGAAACACCCTTTTCATGGGCACCCTCTTACTCTTCTCTCCAAGGCACCTCCATATGATGGTATTTATAGGTGTGATGGATGCAAATTGTCGAGCAATGGCTTTGTTTATCGTTGTGATGAGTGTCAATTCGACCTTGATGTTTGTTGTGGTTCCCTTCCGGAGACAGTTAAACATGAAAGTCACGGTCACACGCTTCTTTTGAAGAAGACAAGCGTTCCAAGACAATGCAAAGGTTGTCATCTTCGGTCGAATCATGTCTATGTATGTGATGTTTGTGAAGATTTTGCTATTGATTTTGGATGTGCTACTCTACCGGGTAAGGCATGGTACATGTATGACAAACATCCTCTCTCTCTAACCTACTTTGTTGTTGGTGATTTGAGGGAATATGAATGTGGCATTTGCAATGAGAAAATGTCTCAAAAGCAATGGTTTTACTATTGTGATGATTGTGAATTTGCTGCTCATCCTTGTTGTGTTGTTGGCAAGTTTAGGCGTGTTAAGTTTGGAGGCACTTTCGAATATGATGCTCACTCGCACCCTCTTGCTTTGGTTGAAGAAACTAAGGGGAACAGTACATGTAAAGCCTGTGGTAAATGCTGCAATGGATGGGCACTTGAATGTGGCGAATGCAAATGCTACTTCCACAGAGAAGGGAAGTGTTTCTGGGAACAATTTAAACAGAGTGCTAAGTTTTTAGGATTATCAGAAAAGATGAGGCACAGGTATTTATGGAAGTGTCTTGCACCTCCAAAGACCTTAGCCTTTTCCTGGCAGCTTCTTTTGGATAGATTACCTACTGAGGCAGTGGATGCCTCAGGTGTGGTTGATCACTATGTCAAATTCTATGGGCTAATGCATCAGAGGAAGCTAAAAAGAGCCTGGCCTTACTTTGTTGTCCTTGTAGGAGTTTACCCGGCTGTTTCAGATGTTATGCAGGGGTTTTTTCTGCTGTATGGGGGGTATTGGTAG 2151 0.4133 MAASAYISSSSLYQAKQDPLFLLSSFSFGGIFGVGERNAYQVHMAALLSFCLIARPTYNTIRVALTCTIAAQNFVIHQKLPFPSSIIYPCPSPVHSHPLLLKEDQKNEEQQVFCSGCEKPISGPVFCCDHCNYVLHKSCAELPRQMKHPFHPQHVLQLLSTSPYKGRYICNACRGLFNKFVYHCYICQYDLDMACASRLRPDDGHSHVFISLTYLTPFYCYACGEQADENLSCLCTICQIRVHSSCAELPQDIRINCHHHRLKLNYTLHHVYGFGVDLTCGACNEKMSSTFAGYFCSSCEYPVHLKCAQQHLIDDYCETETEGEELKTDEFQYLGFSLFSHDHLLKFMEEQSLEYVDKLCDGCIQPITPPFFSCSKNCGFLLHQSCAELPRTKKHPFHGHPLTLLSKAPPYDGIYRCDGCKLSSNGFVYRCDECQFDLDVCCGSLPETVKHESHGHTLLLKKTSVPRQCKGCHLRSNHVYVCDVCEDFAIDFGCATLPGKAWYMYDKHPLSLTYFVVGDLREYECGICNEKMSQKQWFYYCDDCEFAAHPCCVVGKFRRVKFGGTFEYDAHSHPLALVEETKGNSTCKACGKCCNGWALECGECKCYFHREGKCFWEQFKQSAKFLGLSEKMRHRYLWKCLAPPKTLAFSWQLLLDRLPTEAVDASGVVDHYVKFYGLMHQRKLKRAWPYFVVLVGVYPAVSDVMQGFFLLYGGYW* 717
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g02910 716 SUPERFAMILY Cysteine-rich domain 63 144 IPR046349 -
Rops8g02910 716 SMART c1_12 258 317 IPR002219 -
Rops8g02910 716 SMART c1_12 205 257 IPR002219 -
Rops8g02910 716 SMART c1_12 95 145 IPR002219 -
Rops8g02910 716 SUPERFAMILY Cysteine-rich domain 234 310 IPR046349 -
Rops8g02910 716 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 100 174 IPR013083 -
Rops8g02910 716 SUPERFAMILY Cysteine-rich domain 476 558 IPR046349 -
Rops8g02910 716 ProSitePatterns Zinc finger phorbol-ester/DAG-type signature. 269 317 IPR002219 -
Rops8g02910 716 Pfam C1 domain 339 387 IPR004146 -
Rops8g02910 716 Pfam C1 domain 149 196 IPR004146 -
Rops8g02910 716 Pfam C1 domain 396 442 IPR004146 -
Rops8g02910 716 Pfam C1 domain 93 140 IPR004146 -
Rops8g02910 716 SUPERFAMILY Cysteine-rich domain 121 198 IPR046349 -
Rops8g02910 716 SUPERFAMILY Cysteine-rich domain 371 456 IPR046349 -
Rops8g02910 716 ProSiteProfiles Zinc finger phorbol-ester/DAG-type profile. 258 317 IPR002219 -
Rops8g02910 716 ProSiteProfiles Zinc finger phorbol-ester/DAG-type profile. 206 257 IPR002219 -
Rops8g02910 716 PANTHER CYSTEINE/HISTIDINE-RICH C1 DOMAIN FAMILY PROTEIN 95 201 - -
Rops8g02910 716 SMART PHD_3 219 261 IPR001965 -
Rops8g02910 716 SMART PHD_3 524 591 IPR001965 -
Rops8g02910 716 SMART PHD_3 359 421 IPR001965 -
Rops8g02910 716 SMART PHD_3 113 174 IPR001965 -
Rops8g02910 716 SMART PHD_3 279 321 IPR001965 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g02910 Rops-Chr8 65241919 65251169 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g02910 - - gmx:121174110 834.713