Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g02898 ATGCAGGGAGCAAAGAAAGCAGGAGAGACCATTAAGGAAACAGCAGCTAACATTGGTGCTTCTGCCAAATCTGGTATGGAGAAGACCAAGGCCACTGCCCAAGAGAAGACAGAGAGAATGACAGCACGTGATCCTTTGCAAAAGGAAATGGCAACTCGGAAGAAAGAAGAAAGACTTAACCAGGCGGAGCTGGATAAGCAGGCGGCGCGTGAGCACAACGCGGCGGCTAAACAGGCAGCCTCGACTGGGTACGGCGGGCCGGGCCACCACACCACCGGTACCGGGACCGCCGCGTACTCCACCACAGGGGAATATGGGCAGCCCATGGGGGCCCATCAGACATCAGCAGTGCCCGGTCATGGAACTGGACAGCCCACGGGCCATGTCACCGAGGGAGTGGTGGGCTCACACCCTATTGGGACGAATAGAGGCACGGATGGGACCGCTAAGGCCCATAATACCCGTGTTGGTGGAAATACAAATGCCTCAGGGTATAGCACTGGCGGTACTCACCGTTAA 519 0.5703 MQGAKKAGETIKETAANIGASAKSGMEKTKATAQEKTERMTARDPLQKEMATRKKEERLNQAELDKQAAREHNAAAKQAASTGYGGPGHHTTGTGTAAYSTTGEYGQPMGAHQTSAVPGHGTGQPTGHVTEGVVGSHPIGTNRGTDGTAKAHNTRVGGNTNASGYSTGGTHR* 173
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g02898 172 Coils Coil 52 79 - -
Rops8g02898 172 Pfam Late embryogenesis abundant (LEA) group 1 9 78 IPR005513 GO:0009793
Rops8g02898 172 MobiDBLite consensus disorder prediction 85 109 - -
Rops8g02898 172 MobiDBLite consensus disorder prediction 1 172 - -
Rops8g02898 172 PANTHER LATE EMBRYOGENESIS ABUNDANT PROTEIN 6-RELATED 10 160 IPR005513 GO:0009793
Rops8g02898 172 MobiDBLite consensus disorder prediction 29 72 - -
Rops8g02898 172 MobiDBLite consensus disorder prediction 141 172 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g02898 Rops-Chr8 65031932 65033623 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g02898 - - gmx:547828 259.996