Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g02877 ATGACGGAACCACCAACAGAGCCATGCACGTCTTCTTCTTCTTCTTCTTCTTCATTAAGGGACCCAAACACGGTGATTCACCCAAGGCGCGAGCTCTTGGAGCACGGTCTCTTACCAATCCCACGCCTCATCTTCTCCGACCCGACGCAAACCCTAATCTCCTTGAAACAGAAGCTTCTAGCATCATCTTCCAACCAGCGAGTCGACTCGGCGGCAATCTCCGAGTCGTTGCAGATCTCCGTCGAACACGCCAGGCTCGTTCTCGATACCCTAGCTTCGGTTCTTCCCTCAGACTCCGAACCTCTCGTCACCGCCAGGCTCGGAGAAACCGAATCTGTTGGCGTTGATGTTCATGATCTGGTTCTGTTCCTCTACATTCAATCCTACAAGAGACTCCTTCCGCGAACGCACAAAGACTCCGTCGCAGTTGCTGATGTTTGGCCTTCAACCTCTGCCTTCGATGGCTATTTATCCGCTCTCTCGCCGCTTCAGCTTGTGCGCAGCAACAGTCGAAGGTTTATGCCATCGCAGGCTGATGAAGAGGCTCATCAGTTATCGTATCTGCAAAAGCACTTGACTAACATTCTGTCTCTTCTAGCAGAGCCTGTGGAGGGGGAAGGCGAAGAATCTCTGGTTTTAACCATGGATAGATTTGAGCACCTTGGGTTTCTAATTCAGTTTGGTGATAAGGGATCTGAAAGAAATTCTTTGAATCAATCTTCTCCTTTTTTTGCAAACTCGGATCCTGACATGCCTGCTGTTCCTGTTCCTGTTGCCCAAGTTCATGACTGGCTTCTGCAAAATATAGCTTCTGCTTTGGAACATATTTCTGAACGGACTTCTTCAAAGGAAAATGGCCCAGCTAGCGCCTCTGATCAGGATGTTGCTATGACTGATGCATGCACTTTCTCAACAAGTACTAGAGGTGCAAGTTTCATTGAAGGGATCTCTAAATCATCATATGTGAAGAATGCATCTGATATTAAAGGTTCCTCCGTTAAGGTTGGAAATTGCCACGAGTCTGCCATTTATATCTTAGCACCTTTGAGATATGCCACTGTGTATGGATGTTCAGATGCAACAATAGTTCTAGGAGCAGTTGGAAAGGCTGTGAGAGTAGAACACTGTGAACGAGTTCATGTGATTGTAGCAGCAAAACGAATTTGTATTGCTAACTGCCGAGAATGTGTTTTCTTTCTGGGAGTGAACCAGCAACCTCTTATTCTTGGTGATAACCATAAGTTGCAGGTGGCTCCCTATAATACCTTTTACTCCCAGTTGGAGGAGCATATGAATGAAGTTGGAATTCTTCCCACAGTGAACCGATGGGATGAACCTCTTGCATTGGGCATGGTTGATCCCCATGATTCACTATCTCATCCAGCAGGTGTCTCTGATGTTCAAGCAGAGTCTGCTACACGGGTGGACCCTGATCAGTTCACTAATTTTGTGATTCCAAATTGGCTTGGAGGAGAGTCCAGTGGGTCTACCAAAGACAACCCGTTCACTTTACCAGATGCTTATATGGCATCTCAGCGTAAAAATAAAATATTTTTAGGGGAGATTAGGCAACTCTTACGAGAAGCACCTTTAGAAGAAAGTCGGAAACGAGAATTGTCATCTGCTCTCCATGTGTACTTCAAGGACTGGCTATATGCTTCCGGGAACATTCGTCAGCTTTACTGTCTACAAGGCGATTGA 1701 0.4633 MTEPPTEPCTSSSSSSSSLRDPNTVIHPRRELLEHGLLPIPRLIFSDPTQTLISLKQKLLASSSNQRVDSAAISESLQISVEHARLVLDTLASVLPSDSEPLVTARLGETESVGVDVHDLVLFLYIQSYKRLLPRTHKDSVAVADVWPSTSAFDGYLSALSPLQLVRSNSRRFMPSQADEEAHQLSYLQKHLTNILSLLAEPVEGEGEESLVLTMDRFEHLGFLIQFGDKGSERNSLNQSSPFFANSDPDMPAVPVPVAQVHDWLLQNIASALEHISERTSSKENGPASASDQDVAMTDACTFSTSTRGASFIEGISKSSYVKNASDIKGSSVKVGNCHESAIYILAPLRYATVYGCSDATIVLGAVGKAVRVEHCERVHVIVAAKRICIANCRECVFFLGVNQQPLILGDNHKLQVAPYNTFYSQLEEHMNEVGILPTVNRWDEPLALGMVDPHDSLSHPAGVSDVQAESATRVDPDQFTNFVIPNWLGGESSGSTKDNPFTLPDAYMASQRKNKIFLGEIRQLLREAPLEESRKRELSSALHVYFKDWLYASGNIRQLYCLQGD* 567
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g02877 566 Gene3D - 310 472 IPR016098 -
Rops8g02877 566 PANTHER UNCHARACTERIZED 22 564 IPR039589 -
Rops8g02877 566 MobiDBLite consensus disorder prediction 1 23 - -
Rops8g02877 566 Pfam Tubulin binding cofactor C 330 445 IPR012945 -
Rops8g02877 566 ProSiteProfiles C-CAP/cofactor C-like domain profile. 299 436 IPR017901 -
Rops8g02877 566 SMART carp 376 410 IPR006599 -
Rops8g02877 566 SMART carp 338 375 IPR006599 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g02877 Rops-Chr8 64732847 64742324 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g02877 K16810 - gmx:100819271 984.556
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops8g02877 8 64732847 64742324 Rops8g02877 8 64732847 64742324 ECH