Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g02857 ATGGCACCGAGATGGAAGGGAAAAAATGCAAAAGCTAAAAAGGATGCAGAAGCTGAAGCACTTAAAGAACCCATGTCAAAGATAATATCTCAACTTCAGTCTTCTCTAGTTCAATCAGATGCTTGTGGGTTTCTCTCTGATAACTGTGTACACTTAGCAGTGGGAGCAGAGCCAATTGATATTCTTGATAAAGCTTGCTTTGGTCGACCAGTGAGAACAGTTGAAAAGGACACATTTTGGTTTCAATTAAGCTTGGAGGAAGCATTCTACCTATGCCATTCCTTGAAATGCCTTAAGATTAATGATGGTGATACGGGTCCCAAAAATGATGAAGAGCTTTGGCATTACATGAAGTCCAAGAAAGAAGCATTCCCTTGTTTCTACAAGGCTTATTCTCACCTTCGAATGAAAAATTGGGTAGTGAGGTCAGGGGCTCAGTATGGTGTAGACTTCATTGTCTATCGTCATCATCCAGCTCGGGTCCATTCTGAATATGGTGTACTTGTTCTATCAGATGGGGATGATAAAGATCTAAATGCAAGATTGCAAGTATGGTCTGATGTTCATTGCACAACTCGGCTTCTTGGAAGTGTTGCAAAAATCTTATTGGTTATGTACATCAATAAAAATGGTGATGGTGATGAGTCTCCATTATGTTTGGAAAACTATACAGTTGAAGAGCGCACAATCAGCAGATGGAGTCCAGAACAATGCCGTGAAAGATGTAATTCATGCTAA 738 0.4011 MAPRWKGKNAKAKKDAEAEALKEPMSKIISQLQSSLVQSDACGFLSDNCVHLAVGAEPIDILDKACFGRPVRTVEKDTFWFQLSLEEAFYLCHSLKCLKINDGDTGPKNDEELWHYMKSKKEAFPCFYKAYSHLRMKNWVVRSGAQYGVDFIVYRHHPARVHSEYGVLVLSDGDDKDLNARLQVWSDVHCTTRLLGSVAKILLVMYINKNGDGDESPLCLENYTVEERTISRWSPEQCRERCNSC* 246
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g02857 245 FunFam tRNA-splicing endonuclease subunit Sen2-1 123 219 - -
Rops8g02857 245 Pfam tRNA intron endonuclease, catalytic C-terminal domain 128 212 IPR006677 GO:0000213|GO:0006388
Rops8g02857 245 CDD tRNA-intron_lyase_C 128 212 IPR006677 GO:0000213|GO:0006388
Rops8g02857 245 Pfam tRNA intron endonuclease, N-terminal domain 44 105 IPR006678 GO:0000213|GO:0006388
Rops8g02857 245 PANTHER TRNA-SPLICING ENDONUCLEASE SUBUNIT SEN2 3 75 IPR006676 GO:0000213|GO:0006388
Rops8g02857 245 Gene3D - 123 218 IPR011856 GO:0003676
Rops8g02857 245 SUPERFAMILY tRNA-intron endonuclease catalytic domain-like 124 212 IPR036167 GO:0006388
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g02857 K15322 - gmx:100810335 394.43