Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g02846 ATGAACATTGCAAAACAGATAGCAAAATGGAATGTAATAAATTGTGGGCAAAAGTGGGAAAAAAGGGGTACTTACTCAACACTCTGTGTGGTTTCATGTCCCTCGGAAATTCCTACATCGGAAACGACGTTTAACTCCGAGGAAGAGGAAGAGGAAGAGGAAGAGGAGCAATTTCCGTTGTTTGTGTCGGAAAGACAGAGAAAAAACATGGCTATTGCAGCAGTGGTTGTCGTGGTGCCAGTAGCCCTGCTCTTCTTTGCTTCGGGCCTCGTTGTTAATCTCATTCAGGCAATATGCTATGTCATTGTAAGGCCACTGTCAAAGAATTTATACAGACGGATCAACCGGGTAGTAGCAGAATTGTTGTGGCTGGAACTTGTATGGCTTATTGATTGGTGGGCAGGAGTTAAGGTACAAGTATTTACAGATCATGAAACCTTTCGTTTGATGGGTAAAGAGCACGCCCTTGTCATATGCAATCACAGAAGTGATATTGATTGGCTTGTTGGATGGGTTTTAGCTCAGCGCTCAGGTTGCCTTGGTAGTTCTCTAGCAGTGATGAAGAAATCGTCAAAGTTTCTGCCGGTCATTGGCTGGTCAATGTGGTTTTCGGAGTATCTTTTTTTGGAGAGAAGTTGGGCCAAGGATGAAAGCACATTGAGGTCAGGCCTCCAGAGGTTGAGTGATTTCCCTCTTCCATTTTGGTTGGCTCTCTTTGTAGAAGGAACACGCTTTACGCAGTCCAAACTATTAGCTGCTCAGGAATATGCAACCTCCACCGGATTGCCTGTTCCTAGAAACATTTTGATTCCTAGAACTAAGGGTTTTGTTTCAGCAGTAAGTCATATGCGCTCATTTGTTCCTGCCATTTATGATGTCACAGTGGCTATCCCTAAAAGTTCACCTGCTCCCACAATGCTAAGACTCTTCAAGGGACAAAGTTCAGTGGTGCACGTTCATATCAAGAGGCATTTGATGAATGAATTGCCAGAAACAGATGAAGCTGTTGCTCAATGGTGTCGAGATGTATTTGTAGCTAAGGATGCATTGTTAGACAAACACATAGCTGAGGATACTTTTAGCGATCAAGAGCTACAGAATACTGGTCGACCAATAAAGTCTCTTCTGGTTGTTGTATCTTGGGCTTGTCTGGTTGTTGCGGGGTTTGTAAAGTTCCTACAATGGTCTTCACTGCTATCATCCTGGAAGGGTGTTGCATTTTCAACTTTTGGTTTGGCAGTGGTCACTGTCCTCATGCACATCTTGATTCTATTCTCACAGTCAGAGCGTTCAACCCCAGCCAAGGTAGCCCCTGCAAAGCAAAAGAACAAGGGGGAACAACTGGAGCCTAGGAATGACAAACAACATTAG 1371 0.4406 MNIAKQIAKWNVINCGQKWEKRGTYSTLCVVSCPSEIPTSETTFNSEEEEEEEEEEQFPLFVSERQRKNMAIAAVVVVVPVALLFFASGLVVNLIQAICYVIVRPLSKNLYRRINRVVAELLWLELVWLIDWWAGVKVQVFTDHETFRLMGKEHALVICNHRSDIDWLVGWVLAQRSGCLGSSLAVMKKSSKFLPVIGWSMWFSEYLFLERSWAKDESTLRSGLQRLSDFPLPFWLALFVEGTRFTQSKLLAAQEYATSTGLPVPRNILIPRTKGFVSAVSHMRSFVPAIYDVTVAIPKSSPAPTMLRLFKGQSSVVHVHIKRHLMNELPETDEAVAQWCRDVFVAKDALLDKHIAEDTFSDQELQNTGRPIKSLLVVVSWACLVVAGFVKFLQWSSLLSSWKGVAFSTFGLAVVTVLMHILILFSQSERSTPAKVAPAKQKNKGEQLEPRNDKQH* 457
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g02846 456 PANTHER 1-ACYLGLYCEROL-3-PHOSPHATE ACYLTRANSFERASE-RELATED 77 421 - -
Rops8g02846 456 CDD LPLAT_LCLAT1-like 131 322 - -
Rops8g02846 456 SUPERFAMILY Glycerol-3-phosphate (1)-acyltransferase 115 356 - -
Rops8g02846 456 MobiDBLite consensus disorder prediction 430 456 - -
Rops8g02846 456 SMART plsc_2 155 277 IPR002123 GO:0016746
Rops8g02846 456 Pfam Acyltransferase C-terminus 308 381 IPR032098 -
Rops8g02846 456 Pfam Acyltransferase 149 297 IPR002123 GO:0016746
Rops8g02846 456 MobiDBLite consensus disorder prediction 442 456 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g02846 Rops-Chr8 64087729 64105497 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops8g02846 70 444 Miscellaneous Gene Families AT3G57650 77.333 0.0 615
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g02846 K13523 - gmx:100792858 688.337
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops8g02846 8 64087729 64105497 Rops8g02846 8 64087729 64105497 ECH