Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g02827 ATGACGGTGACACCTAAGATCTCTGTTAACGATGGGAACCTTGTTGTCCATGGCAAGACCATACTTACAGGTGTGCCGGACAACGTTGTACTGACTCCAGGATCTGGGAGCGGTCTTGTGACGGGTGCATTTGTTGGTGCTACTGCTTCACATAGCAAAAGCCTCCATGTATTTCCCATGGGTATCTTAGAGGGGCCCCGGTTCATGTGTTGTTTCCGGTTCAAGTTATGGTGGATGACTCAAAGAATGGGAACTTGTGGGAGGGATGTTCCTCTGGAGACCCAATTCATGCTTATAGAGAGCAAAGACGACGAAGGAGATGAAGAGAATTCTCCTACCATTTACACTGTCTTACTTCCTCTCCTGGAAGGTCAATTCCGATCTGTTCTACAGGGCAATGACAAAAACGAGCTAGAGATTTGTCTCGAGAGTGGGGATAATGCTGTTGAGACTAACCAAGGCCTTCACCTGGTCTACTTGCATGCTGGGACCAACCCTTTTGAAGTCATCAACCAAGCTGTCAAGGCTGTGGAAAAGCACATGCAAACTTTTCTTCATCGTGAGAAAAAGAGATTGCCATCTTTTCTTAACTGGTTTGGCTGGTGTACATGGGATGCTTTCTATACTGATGTCACAGCTGAGGGTGTCGAGGAAGGACTGAAAAGTCTATCAGAGGGAGGTACACCTCCACGGTTCCTCATCATAGATGATGGTTGGCAACAGATTGAGAGTAAACAGAAGGATGCTGATTGTGTCGTACAAGAAGGAGCACAGTTTGCTACTAGGTTGACTGGTATCAAAGAGAACACTAAATTTCTAAAAGATGGACAGAACAACGAACAAATATCAGGTCTCAAGCATCTTGTAGATGGAGTAAAGCAACATCACAGTGTGAAAAATGTTTATGTATGGCATGCCCTAGCTGGTTATTGGGGTGGAGTGAAGCCAGCAGCAACTGGCATGGAACATTATGACACTGCCTTGGCATACCCAGTGCAATCACCAGGTGTACTAGGAAACCAACCAGACATTGTCATGGACAGCTTGGCTGTACATGGTCTTGGCCTAGTGCACCCAAAGAAGGTTTTCGATTTCTACAATGAGCTCCACGCTTACTTAGCATCATGTGGAGTAGATGGAGTGAAGGTTGATGTGCAGAACATTATTGAGACCCTCGGTGCCGGACATGGTGGTAGAGTCTCACTTACACGCAGCTATCATCATGCACTTGAGGCTTCCATTGCTCGTAACTTTGCTGACAATGGATGCATTGCATGTATGTGTCACAACACTGATGGACTTTACAGTGCTAAGCAGACAGCTGTTGTGAGAGCTTCTGATGATTTTTACCCACATGATCCTGCATCACACACCATCCATATTTCATCTGTTGCATACAACTCACTTTTCCTTGGAGAATTTATGCAACCAGATTGGGACATGTTCCATAGTTTACACCCAGCTTCTGAGTATCATGCTGCTGCTCGTGCAATTGGTGGATGTCCAATTTATGTTAGTGACAAACCGGGCCACCACAATTTTGATCTTCTTAAGAAGCTGGTTCTCCCTGATGGTTCTGTTCTTTGTGCTCAGTTACCTGGCAGGCCTACCCGTGACTCTCTCTTTACTGATCCTGCTAGAGATGGGACTAGCTTGCTCAAGATATGGAACTTGAACAAATGCTCTGGAGTTGTTGGTATCTTTAATTGCCAAGGTGCTGGGTGGTGCCAGGTAGAGAAGAAAACCCGCATCCACAATGCATCTCCTGGTACACTCACTGGTTCTGTTTGTGCCTCTGATGTTGACCTCATCAATCAAGTAGCTGGTGCTGAATGGCTTGGCGAGACTATTGTATATGCTTACAAATCTGGTGAGGTGATTCGGCTACCAAAAGGGGTTTCACTTCCAGTGACACTAAAAGTTCTGGAGTTTGAACTTTTCCATTTTTGTCCAATCCATGAAATAGCACCAAGTATTTCATTTGGAGTAATAGGCCTATTGGATATGTTCAACACTGGAGGAGCTGTGGAGCAGGTTGAAATCCATAGAGCCTCTGACAACAATCAAAAACTAGTTGATGGTGAGGTGTTATCAGAACTTACCACTTCTTCTCTCAGTTCTAATCGAGCAACAACAGCAACTATTGCTTTGAGAGTTAGAGGAACTGGTAAATTTGGGGTGTACTCTTCCCAGCGGCCACTGAAGTGTGTGGTAGGTGGCACTGAAACCGAGTTCAACTATGACTCAGAGAATGGATTGACAACCTTCTCCATCCCAGTTCCTTCAGAGGAGATGTACATATGGTCAATAGAGATCCAAGTTTAA 2325 0.4516 MTVTPKISVNDGNLVVHGKTILTGVPDNVVLTPGSGSGLVTGAFVGATASHSKSLHVFPMGILEGPRFMCCFRFKLWWMTQRMGTCGRDVPLETQFMLIESKDDEGDEENSPTIYTVLLPLLEGQFRSVLQGNDKNELEICLESGDNAVETNQGLHLVYLHAGTNPFEVINQAVKAVEKHMQTFLHREKKRLPSFLNWFGWCTWDAFYTDVTAEGVEEGLKSLSEGGTPPRFLIIDDGWQQIESKQKDADCVVQEGAQFATRLTGIKENTKFLKDGQNNEQISGLKHLVDGVKQHHSVKNVYVWHALAGYWGGVKPAATGMEHYDTALAYPVQSPGVLGNQPDIVMDSLAVHGLGLVHPKKVFDFYNELHAYLASCGVDGVKVDVQNIIETLGAGHGGRVSLTRSYHHALEASIARNFADNGCIACMCHNTDGLYSAKQTAVVRASDDFYPHDPASHTIHISSVAYNSLFLGEFMQPDWDMFHSLHPASEYHAAARAIGGCPIYVSDKPGHHNFDLLKKLVLPDGSVLCAQLPGRPTRDSLFTDPARDGTSLLKIWNLNKCSGVVGIFNCQGAGWCQVEKKTRIHNASPGTLTGSVCASDVDLINQVAGAEWLGETIVYAYKSGEVIRLPKGVSLPVTLKVLEFELFHFCPIHEIAPSISFGVIGLLDMFNTGGAVEQVEIHRASDNNQKLVDGEVLSELTTSSLSSNRATTATIALRVRGTGKFGVYSSQRPLKCVVGGTETEFNYDSENGLTTFSIPVPSEEMYIWSIEIQV* 775
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g02827 774 Pfam Raffinose synthase or seed imbibition protein Sip1 7 757 IPR008811 -
Rops8g02827 774 SUPERFAMILY (Trans)glycosidases 190 520 IPR017853 -
Rops8g02827 774 PANTHER - 1 772 IPR008811 -
Rops8g02827 774 Gene3D Aldolase class I 196 520 IPR013785 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g02827 Rops-Chr8 63695836 63701786 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops8g02827 1 556 Glycoside Hydrolase AT3G57520 81.329 0.0 981
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g02827 K06617 - gmx:100807861 1409.05
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops8g02827 8 63695836 63701786 Rops8g02827 8 63695836 63701786 ECH