Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g02798 ATGGCGGGGAAGTTGTTGAAGAAAGGTTTGGGAGAAATGGGTTTCAACGCTGATGGTGGTGCCATAAACTGGTTCCCTGGACACATGGCAGCCGCCACACGTGCCATCCTTAACCGCTTTAAACTCTCCGACCTCGTAATCGAAGTACGAGACGCTCGTATTCCCTTGTCCTCCGCTAACTCCCACCTTCAACCCCACCTCTCTTCAAAACGACGCGTCGTCGCACTCAATAAAAAGGACTTAGCCAACCCTAACATCATGCATAAATGGACACACTATTTCGACACGTGCAAGTTAGATTGCATTCCCATAAACGCCCATAGCAAGAGTTCAGTCACGAAGCTTCTGGAACTTGTGGAGTTCAAATTGAAACAAGTGATTTCGAAGGAACCTACTTTACTTGTTATGGTGGTTGGTGTTCCTAATGTTGGGAAATCTGCTTTGATTAATTCCATTCATCAAATTGCAAAGTCTCGATTTCCCGTGCAGGAGAAGAATAAGCGTGCTGCTGTGGGTCCATTACCTGGTGTTACTCAAGATATTGCAGGATTCAAGATAGCACATAAACCGAGCATATATGTCCTAGATACCCCAGGAGTTCTGGTTCCAAGCATCTCAGACATAGAGACAGGGTTAAAGTTGGCTCTTGCAGGGTCTGTGAAAGATTCAGTGGTGGGTGAGGAGCGAATTGCTCAGTACTTGTTGGCAATTTTGAATACCCGGGGGACTCCACTTCACTGGAAGCACCTAAATAACAGGAGAATAGATGGGATTGAACATGAAGCTGAGGAAAATCATGTATATGATCTGAAAAATCTTAAGCGGAAGAGAAGAAATCTGCCAAATAGATCTGACTTGGTATATGTGGAGGATCTTGTAATGGAAGTTCAGCGTGCACTCTATTTGACCCTGGCAGAATTCAATGGCAAAGTAGAAGATGAGAGTGACTTAGAGAGCCTTATTGACCTGCAGTTTGGTGCATTGCAAAAGGCAATGAAGATACCTCACAAGGCTTCAGAAGCAAGGTTGATGGTATCAAAGAAGTTCCTCACTCTATTCAGGACTGGTAAACTAGGACCTTTCATTCTTGATGATGTCCCCCATGTCAACCCTGTATCATAA 1122 0.4456 MAGKLLKKGLGEMGFNADGGAINWFPGHMAAATRAILNRFKLSDLVIEVRDARIPLSSANSHLQPHLSSKRRVVALNKKDLANPNIMHKWTHYFDTCKLDCIPINAHSKSSVTKLLELVEFKLKQVISKEPTLLVMVVGVPNVGKSALINSIHQIAKSRFPVQEKNKRAAVGPLPGVTQDIAGFKIAHKPSIYVLDTPGVLVPSISDIETGLKLALAGSVKDSVVGEERIAQYLLAILNTRGTPLHWKHLNNRRIDGIEHEAEENHVYDLKNLKRKRRNLPNRSDLVYVEDLVMEVQRALYLTLAEFNGKVEDESDLESLIDLQFGALQKAMKIPHKASEARLMVSKKFLTLFRTGKLGPFILDDVPHVNPVS* 374
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g02798 373 Gene3D - 206 310 IPR023179 -
Rops8g02798 373 FunFam Mitochondrial GTPase 1 22 201 - -
Rops8g02798 373 Pfam 50S ribosome-binding GTPase 135 239 IPR006073 GO:0005525
Rops8g02798 373 Gene3D - 22 201 IPR027417 -
Rops8g02798 373 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 28 216 IPR027417 -
Rops8g02798 373 CDD YlqF 24 201 - -
Rops8g02798 373 PANTHER MITOCHONDRIAL RIBOSOME-ASSOCIATED GTPASE 1 13 369 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g02798 Rops-Chr8 63049238 63053591 Dispersed/Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g02798 K19828 - gmx:100801130 644.039
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops8g02798 8 63049238 63053591 Rops8g02798 8 63049238 63053591 ECH