Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g02780 ATGAGTACACATGGTTCTTACAACATGAGATCCAAATCTTCCTCCTTTGAAAATGAAAACAAGAGCACATTAAAAGAAAGTGGGGGAGGAAGTGCAGGGAAAACTGGGAAGATGATGTCAAACAGCAAGGAAAACTTGTTCATATGTTTTCTTGTGACACTTTGGTACTCTTCAAACATTGGTGTCATTCTTCTCAACAAGTACTTGCTCTCCAATTATGGGTTCAAGTTCCCAATCTTCCTCACAATGTGCCACATGTCAGCCTGTTCTGTTCTCAGCTACATTTCCATTGTGTTCTTCAAGCTTGTGCCTCAACAGATGATTAAATCAAGGTCCCAGTTCATAAAGATTGCAACTTTGAGTCTTGTGTTTTGTGCGTCTGTGGTTGGTGGCAATATCTCCCTCAGGTACCTGGCTGTTTCTTTCAACCAAGCGGTGGGTGCAACCACACCTTTCTTCACTGCTGTCTTTGCCTATTTGGCTACCCTTAAGAGAGAGGCTTGGGTTACATATGCTGCACTTGTTCCTGTTGTTGCTGGGGTTGTCATTGCAAGTGGGGGCGAGCCAGGCTTTCACTTGTTTGGATTCATTATGTGCCTAAGTGCAACCGCTGCAAGAGCTTTCAAGTCTGTCCTTCAGAGCATTTTACTTTCATCTGAAGGGGAAAAGTTGAATTCAATGAATTTGCTCCTGTATATGTCACCAATTGCAGTCCTAGTGTTGTTGCCTGCAGCACTTATCATGGAGCCTAATGTTGTAGATGTCACCATATCGCTTGGAAAAGACCATAAAGCTATGTGGCTACTTCTTTTGCTGAACTCAGTCACAGCATATGCAGCTAACTTAACAAACTTCTTGGTGACTAAACATACTAGTGCTCTGACACTCCAGGTATTGGGCAATGCAAAAGGTGCTGTAGCCGTTGTTATCTCAATACTCTTATTCAGAAACCCTGTCACTTTTGTTGGCATGGCTGGCTACACAGTTACCGTAATGGGAGTTGCTGCATATGGAGAAACAAAAAGGAGGTTTAGATGA 1038 0.4297 MSTHGSYNMRSKSSSFENENKSTLKESGGGSAGKTGKMMSNSKENLFICFLVTLWYSSNIGVILLNKYLLSNYGFKFPIFLTMCHMSACSVLSYISIVFFKLVPQQMIKSRSQFIKIATLSLVFCASVVGGNISLRYLAVSFNQAVGATTPFFTAVFAYLATLKREAWVTYAALVPVVAGVVIASGGEPGFHLFGFIMCLSATAARAFKSVLQSILLSSEGEKLNSMNLLLYMSPIAVLVLLPAALIMEPNVVDVTISLGKDHKAMWLLLLLNSVTAYAANLTNFLVTKHTSALTLQVLGNAKGAVAVVISILLFRNPVTFVGMAGYTVTVMGVAAYGETKRRFR* 346
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g02780 345 Pfam Triose-phosphate Transporter family 48 337 IPR004853 -
Rops8g02780 345 MobiDBLite consensus disorder prediction 1 36 - -
Rops8g02780 345 SUPERFAMILY Multidrug resistance efflux transporter EmrE 234 336 - -
Rops8g02780 345 PANTHER SOLUTE CARRIER FAMILY 35 50 340 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g02780 Rops-Chr8 62753364 62758396 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops8g02780 40 345 Organic Solute Cotransporters AT5G04160 81.046 0.0 514
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g02780 - - gmx:100782949 594.734
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops8g02780 8 62753364 62758396 Rops8g02780 8 62753364 62758396 ECH