Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g02777 ATGGTGGGAAGCATTATGGGAATGGTTCGAAATACATACTCAAATGGATCTGTTCAGAATTGTAATGGCATAGAAGAGAAGCTTGATGATCTTAGAAGGCTTGTTGGCAAAGCTGATGGTGATCCATTGAGAATTGTAAGTGTTGGAGCCGGTGCTTGGGGCAGTGTTTTTGCAGCTTTGCTACAAGACACTTATGGCCAATTTAGAGACAAGGTGCAAATCAGGATATGGAGAAGATCAGGAAGAGCAGTTGATAGAGCCACTGCAAAACATCTCTTTGAAGTTATCAACTCAAGGGAAGATGTGTTGAGAAGGTTGATCAGAAGGTGTGCTTATTTGAAATATGTTGAAGCAAGGCTTGGTGATAGGACCCTATTTGCTGATGAGATTCTGAAAGATGGGTTTTGTTTGAATATGATTGATACTCCACTTTGTCCTTTGAAAGTGGTGACAAACTTGCAAGAAGCTGTTTGGGATGCTGATATTGTGGTTAATGGTTTGCCTTCAACAGAAACACGTGAGATTTTTGAAGAGATTAGTAAATATTGGAAGGAGAGGATCACAGTGCCTATAATAATCTCTTTATCAAAGGGTATAGAGGCAGCATTGGAGCCTGTTCCTCATATTATAACTCCTACAAAAATGATTAACCAAGCAACTGGAGTGCCTATGGAGAACATACTTTATCTTGGTGGTCCAAATATTGCCTCAGAAATCTACAACAAGGAGTATGCAAATGCTCGAATTTGTGGAGCTAACAAATGGAGGAAACCTCTGGCAAAGTTTCTAAGGCAACCACAGTTTATTGTCTGGGACAATAGTGACCTTGTCACCCATGAGGTCATGGGTGGCTTGAAAAATGTCTATGCAATTGGAGCTGGAATGGTAGCAGCCCTTACCAATGAGAGTGCCACCAGCAAATCTGTGTACTTTGCACACTGCACATCAGAGATGATATTTATCACTCACTTGTTGACTGAAGAACCTGAGAAACTTGCGGGGCCATTACTGGCTGACACTTATGTGACCTTGTTAAAAGGCCGTAATGCATGGTATGGCCAGATGTTAGCTAAGGGACAACTAAGCCCAGATATGGGTGACAGCATTAGTGGTAAAGGAATGATTCAGGGTGTGTCTGCAGTGGAGGCATTCTTTGAACTTTTAAGCCAATCAAGCCTAAATGTGTTGCATCCTGAAGAAAACAAGCCTGTTGCTCCTGTTGAGCTCTGCCCTATCTTGAAGACACTGTACAAAATATTGATATCCAGGGAACAATCAACACAAGCTATTCTAAAAGCTCTGAGGGATGAAAATCTGAATGACCCTCGTGAACGTATTGAGATTGCACAAAGCCATGCTTTCTACAGGCCTTCACTTCTTGGACAAACTTGA 1392 0.4174 MVGSIMGMVRNTYSNGSVQNCNGIEEKLDDLRRLVGKADGDPLRIVSVGAGAWGSVFAALLQDTYGQFRDKVQIRIWRRSGRAVDRATAKHLFEVINSREDVLRRLIRRCAYLKYVEARLGDRTLFADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVVNGLPSTETREIFEEISKYWKERITVPIIISLSKGIEAALEPVPHIITPTKMINQATGVPMENILYLGGPNIASEIYNKEYANARICGANKWRKPLAKFLRQPQFIVWDNSDLVTHEVMGGLKNVYAIGAGMVAALTNESATSKSVYFAHCTSEMIFITHLLTEEPEKLAGPLLADTYVTLLKGRNAWYGQMLAKGQLSPDMGDSISGKGMIQGVSAVEAFFELLSQSSLNVLHPEENKPVAPVELCPILKTLYKILISREQSTQAILKALRDENLNDPRERIEIAQSHAFYRPSLLGQT* 464
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g02777 463 Pfam NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus 275 429 IPR006109 GO:0005975|GO:0047952
Rops8g02777 463 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 43 275 IPR036291 -
Rops8g02777 463 Gene3D - 25 106 - -
Rops8g02777 463 PANTHER GLYCEROL-3-PHOSPHATE DEHYDROGENASE 41 437 - -
Rops8g02777 463 FunFam Glycerol-3-phosphate dehydrogenase [NAD(+)] 137 271 - -
Rops8g02777 463 PRINTS NAD-dependent glycerol-3-phosphate dehydrogenase signature 47 64 IPR006168 GO:0006072|GO:0009331|GO:0047952
Rops8g02777 463 PRINTS NAD-dependent glycerol-3-phosphate dehydrogenase signature 268 292 IPR006168 GO:0006072|GO:0009331|GO:0047952
Rops8g02777 463 FunFam Glycerol-3-phosphate dehydrogenase [NAD(+)] 275 435 - -
Rops8g02777 463 Gene3D - 137 271 - -
Rops8g02777 463 FunFam Glycerol-3-phosphate dehydrogenase [NAD(+)] 25 106 - -
Rops8g02777 463 SUPERFAMILY 6-phosphogluconate dehydrogenase C-terminal domain-like 275 430 IPR008927 -
Rops8g02777 463 Pfam NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus 147 250 IPR011128 GO:0016616|GO:0046168|GO:0051287
Rops8g02777 463 Gene3D - 275 435 IPR013328 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g02777 Rops-Chr8 62724583 62729832 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops8g02777 1 462 Acyl Lipid Metabolism Gene Families AT2G41540 87.473 0.0 821
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g02777 K00006 - gmx:100810871 882.478
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops8g02777 8 62724583 62729832 Rops8g02777 8 62724583 62729832 ECH