Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g02770 ATGCTGTCAAAACTTGCTGGTTTCTATGAGCATAAGAGCTTTCCATTTATCAAAATCTTCATACTAGTTCTCCTTAATTTGATAATTCACAAAGCTGACTCAGGTTGCAACAACTCTGCTGCAACTTCATTAGTTCCATTTCCACCCTATGAAATCCTCTCATCACTACAAGCACTAGCTCTTGATGGCCACTTGAGTTTAAAGGACAATGGTGATGCTGCCAAGGACTTTGGCAACATATACCATTTTCCTCCTCTAGCAGTGCTTCATCCAAAAACAGTTTCTGATATTTCACGCACCATAAAGCATATCTTTGAAATGGGTGCTTCAGAGTTAAAAATTGCTGCTAGAGGCCATGGTCACTCTCTTCAAGGTCAGTCACAAGCACATGGAGGCCTAGTCATCAACATGGAGTCACTGCCGCAGGGTCAAGAAATGAAAGTTCTCACTGGTGAATCTCCTTACGTGGATGTCTCAGGGGGTGAGTTATGGATAAACATTCTGCATGAAACTCTTAAACATGGGTTGGCACCAAAATCTTGGACAGATTACCTTCATCTCACTGTTGGAGGCACTCTTTCAAATGCTGGAATAAGTGGGCAAGCCTTCAAGCATGGACCCCAGATCAATAACATCTTCCAGTTGGAAGTGGTAACAGGAAAAGGAGAGGTGGTAACCTGCTCAGCGAACCGAAATGCTGACCTTTTTTATGGTGTTCTTGGAGGGCTTGGTCAATTTGGCATCATAACCAGGGCTAGAATTTCTCTTGAACCAGCACCAAAGATGGTAAAGTGGATTAGGGTGCTCTACTCAGAATTCTCTACATTTACCAAGGATCAAGAGTATTTGATATCACTCCAAAACACATTTGATTATATTGAAGGATTTGTGATCATAAATAGCACTGGCGTCCTTAACAAGTGGAGATCATCCTTCAACCCCAAAGACCCACTTCAAGCCAACCAATTCAATTCAGATGGAAGAACCTTGTACTGTATTGAGATGGCAAAATACTTCAACCCAGAAGAAGCTGAAGTCATGAATCAGAGTGTTGATCACCTATTGTCACAACTGAGCTATATTCCACCCACTCTCTTCCTATCAGAAGTTTCTTACGTGGAATTCCTGGACAGAGTGCATATTTCTGAGATAAAGCTAAGAGAAAAAGGCTTATGGGAAGTTCCTCATCCTTGGCTGAACCTTCTGATCTCAAGGAATGAGATTCATGACTTTGCTGAAGAAGTATTTGGCAATATTCTTAAGGACACAACAAGTAATGGTCCCATACTCATTTACCCAGTCAACCAAACAAGGTGGAACAGTAAAACATCTTTGGTTACCCCAAAGGAAGATGTTTTCTACCTGGTGGCATTCCTATTCTCAGCAGTCCCATTTCCTACTGGTGCAAACAGTTTAGAATACCTTCAAATCCAAAACACAAGGATCCTAGAATTCTGCACCAATGCCAAGCTCAATGTGAAGCAATATCTTCCACATTACAGCACACAGGAAGAATGGGAAGTCCACTTTGGGTCACAATGGGAGGCATTTGTGGAAAGAAAAACAGCCTATGACCCACTGGCACTGCTTGCCCCTGGCCATAGAATCTTTCAAAAGGCAATCTCTACTTCCTGTTAG 1638 0.4212 MLSKLAGFYEHKSFPFIKIFILVLLNLIIHKADSGCNNSAATSLVPFPPYEILSSLQALALDGHLSLKDNGDAAKDFGNIYHFPPLAVLHPKTVSDISRTIKHIFEMGASELKIAARGHGHSLQGQSQAHGGLVINMESLPQGQEMKVLTGESPYVDVSGGELWINILHETLKHGLAPKSWTDYLHLTVGGTLSNAGISGQAFKHGPQINNIFQLEVVTGKGEVVTCSANRNADLFYGVLGGLGQFGIITRARISLEPAPKMVKWIRVLYSEFSTFTKDQEYLISLQNTFDYIEGFVIINSTGVLNKWRSSFNPKDPLQANQFNSDGRTLYCIEMAKYFNPEEAEVMNQSVDHLLSQLSYIPPTLFLSEVSYVEFLDRVHISEIKLREKGLWEVPHPWLNLLISRNEIHDFAEEVFGNILKDTTSNGPILIYPVNQTRWNSKTSLVTPKEDVFYLVAFLFSAVPFPTGANSLEYLQIQNTRILEFCTNAKLNVKQYLPHYSTQEEWEVHFGSQWEAFVERKTAYDPLALLAPGHRIFQKAISTSC* 546
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g02770 545 Gene3D - 137 261 IPR016169 -
Rops8g02770 545 Gene3D - 262 496 IPR016170 -
Rops8g02770 545 FunFam Cytokinin dehydrogenase 1 137 261 - -
Rops8g02770 545 SUPERFAMILY FAD-binding/transporter-associated domain-like 73 258 IPR036318 GO:0050660
Rops8g02770 545 SUPERFAMILY FAD-linked oxidases, C-terminal domain 260 537 IPR016164 GO:0003824|GO:0050660
Rops8g02770 545 ProSitePatterns Oxygen oxidoreductases covalent FAD-binding site. 85 121 IPR006093 GO:0016491
Rops8g02770 545 ProSiteProfiles PCMH-type FAD-binding domain profile. 81 259 IPR016166 GO:0071949
Rops8g02770 545 FunFam Cytokinin dehydrogenase 2 262 496 - -
Rops8g02770 545 Gene3D - 71 537 IPR016167 -
Rops8g02770 545 PANTHER GULONOLACTONE OXIDASE 42 538 - -
Rops8g02770 545 Pfam FAD binding domain 85 228 IPR006094 GO:0050660
Rops8g02770 545 Pfam Cytokinin dehydrogenase 1, FAD and cytokinin binding 260 537 IPR015345 GO:0009690|GO:0019139|GO:0050660
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g02770 Rops-Chr8 62640008 62642353 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g02770 K00279 - gmx:100777568 929.087