Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g02749 ATGGGATCAGAAACCGAAATGAAGCTTCCAGTTATTGACTTCTCCATTCTGGACTTGGAATCCAATGTTGCTCAGTGGGAATCAGTGAAATCCCACGTCCACAATGCACTTGTAGAGTTTGGTTGCTTTGAGGCTGTGTTTGATAAAGTCCCTTTGGACCTTCGCAAAGCCGTCTTTGTTGAATTGGAAGAGCTGTTCAATCTTCCTTTACAAACCAAGCAGCGCGTTGTGTCAAGTAAGCCCTACCATGGTTATATTGGACCCAGTGACATCTATGAGAGCATGGGGATTGATGATGTACATGTTTCAGAGAAAGTGGAAAGTTTAACCAAGATCTTATGGCCAGAAGGAAAACCAAGTTTTAGCAAAACTCTACAATCCTTCACAGAGCAAGTGACAAGGTTGGATCAGATTATCAGGAAGATGATTTTGGAGAGTTTAGGTGTTGAAAAGTATTTGGAGGAACACATGAAATCAACACATTACCTTGCACGGCTTATCAAGTACAAAGGCCCTCTTACAAATGAAGCAAAAGTTGGCCTACCAGCACACACAGATAAGAACATATTGACCATATTGTGTCAAAATCAAATTGATGGTTTAGAGGTACAAACTAAGAGTGGAGAATGGATCAAATGCAAGCCATCATCATCATATAGTTTCGTGGCTATTACTGGGGACTCCCTCTATGCATGGGCAAACGGCAGGGTGCATACACCCCTTCACCGAGTGATGATGACTGGAAATGAGACAAGGTTCTCCATTGGATTGTTCACAGTTCCAAAACCAGGTTGCATAATAAAAGCCCCAGATGAGCTTGTGACAGAGGAACACCCTTTGCTTTTTAAGCCCTTTATCCACAGTGAGTTCATGAAGTTTCTTCGCTCTTCTGAGGGTGTTAAAAATGCTCTCAAGGTTTATGCTGGAGTCTAA 933 0.4223 MGSETEMKLPVIDFSILDLESNVAQWESVKSHVHNALVEFGCFEAVFDKVPLDLRKAVFVELEELFNLPLQTKQRVVSSKPYHGYIGPSDIYESMGIDDVHVSEKVESLTKILWPEGKPSFSKTLQSFTEQVTRLDQIIRKMILESLGVEKYLEEHMKSTHYLARLIKYKGPLTNEAKVGLPAHTDKNILTILCQNQIDGLEVQTKSGEWIKCKPSSSYSFVAITGDSLYAWANGRVHTPLHRVMMTGNETRFSIGLFTVPKPGCIIKAPDELVTEEHPLLFKPFIHSEFMKFLRSSEGVKNALKVYAGV* 311
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g02749 310 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED 9 292 - -
Rops8g02749 310 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 160 261 IPR005123 -
Rops8g02749 310 Gene3D - 1 297 IPR027443 -
Rops8g02749 310 SUPERFAMILY Clavaminate synthase-like 6 295 - -
Rops8g02749 310 FunFam Probable 2-oxoglutarate-dependent dioxygenase AOP1.2 2 299 - -
Rops8g02749 310 Pfam non-haem dioxygenase in morphine synthesis N-terminal 9 87 IPR026992 -
Rops8g02749 310 Pfam 2OG-Fe(II) oxygenase superfamily 169 259 IPR044861 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g02749 Rops-Chr8 62099590 62100897 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops8g02749 3 283 Glycosyltransferase AT5G59530 22.034 3.33e-10 58.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g02749 - - gmx:100817152 534.643