Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g02747 ATGGGATCCCAATCACAGTCTCAATTTCATGTTGTTGACTTCACCAATGAAAACATGAAGCCAGGCACCGATACATGGCTCTCAGCATGCCATGTTGTGAGAAATGCACTAGAGGACCACGGTTGTTTCGTGGCACGCTATGATAAAATTCGCAAAGAGCTTTGTGACTCTGTTGTCTTGGCAGTGGAAGAATTATTTAGTCTCCCACTGGAAACAAAAACACAAAAGACTAGTGAAAAACTTTTCCATGGTTATTATGGACAAGTCCCCATTCTTCCCTTAGTTGAATCTTTGGCCATTGAAGATCCATTAACTATGAATCAATGTCAAAAATTCGCCCATACAATGTGGCCCCAAGGGAATGATCGTTTCTGGTGTGAAGTGCATTTAGTCTTTAATGAGTTAGGTGCATTGTCTTTGGTGCTAGGAGGGAGTGAAAGCATCAATGAGTATACTAAGCTGTTGGGAGAATTAGACAATATGGTGAAGAGAATGGTGTTTGAGAGCTATGGTGTGGACATGAAACAATGCGATTCTCTCATAGAATCAAGTTATCATCTCCTTCGATGCTTACAATACAGAACACCCCAGATGGATGAAAATGATGCGGGGTTGTTGTCTCACTCTGACTTGAGCATCACATCCATACTGCATCAGCTGAATAGTCAAAATGGGTTGGAAATCAGACTGAAAGATGGTGAGTGGACCCGGGTTGATGTCCCATCCTCCATGTTTGTGATCATGGCTGGTGATGTATTCCACGTGTGGAGTAATGGCAGGATACACCCATGTCAACACAGAGTTACAATGAAAGCAAAGGAAACCAGATACTCCATGGGACTATTTTCTTTTGGTAATAAGATGATGCAGTTACCTGAGGAGCTAATCAATGTGCAACATCCATTGCGTTATAAACCAACATTCCACAATTACGAATACTTTCGTTTCTATGACAAAGAGAGAATCAAAGAAACTGATTCCCGAATCGAAGCCTATTTTGGAATCTGA 1008 0.4147 MGSQSQSQFHVVDFTNENMKPGTDTWLSACHVVRNALEDHGCFVARYDKIRKELCDSVVLAVEELFSLPLETKTQKTSEKLFHGYYGQVPILPLVESLAIEDPLTMNQCQKFAHTMWPQGNDRFWCEVHLVFNELGALSLVLGGSESINEYTKLLGELDNMVKRMVFESYGVDMKQCDSLIESSYHLLRCLQYRTPQMDENDAGLLSHSDLSITSILHQLNSQNGLEIRLKDGEWTRVDVPSSMFVIMAGDVFHVWSNGRIHPCQHRVTMKAKETRYSMGLFSFGNKMMQLPEELINVQHPLRYKPTFHNYEYFRFYDKERIKETDSRIEAYFGI* 336
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g02747 335 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 184 287 IPR005123 -
Rops8g02747 335 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED 11 313 - -
Rops8g02747 335 Pfam non-haem dioxygenase in morphine synthesis N-terminal 24 87 IPR026992 -
Rops8g02747 335 Gene3D - 1 321 IPR027443 -
Rops8g02747 335 Pfam 2OG-Fe(II) oxygenase superfamily 191 283 IPR044861 -
Rops8g02747 335 SUPERFAMILY Clavaminate synthase-like 8 320 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g02747 Rops-Chr8 62033530 62037025 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops8g02747 146 307 Glycosyltransferase AT5G59530 24.551 9.89e-06 45.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g02747 - - gmx:100775440 478.404