Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g02739 ATGGCTTTCAGGGTTCTGGGTTCCAAGTTGAGGCCATTGGCGGCGGTTCACAAATGGTGGCGGTTTCCGTATTCCTCTGCTGCGGTGGCGGAGAGCACGAGGGAAGTGATGGGTCTGAAGGATTATGCAGATTATAGAAGGTCCCTTTATGGCCAAATCACTCACAAGGCCCTTCTTGTTGATGCTGTTGGCACCCTTGTTATTCCTTCTCAACCCATGGCTCAGATATATAGGGAGATTGGGGAGAAGTATGGGGTGAAGTACTCAGAGGATGAGATATTGTGTAGATATAGAAGAGCTTATGGTCAGCCTTGGGGTAAATCTCGTCTCAGATATGTTAATGATGGTAGGCCCTTCTGGCAATACATAGTTAGTTATTCTACTGGGTGTTCAGATTCTCAATACTTTGAAGAACTTTATAAATACTATATGACTGACAAGGCATGGCACCTCTGTGATCCTGATGCAGAAGAAGTATTCAAAGCTGTTAGAAAATCAGGTGTAAAATTGGCTGTTGTGTCAAACTTTGACACTCGATTAAGACCTCTCCTACGGGCATTAAAATGTGATAATTGGTTTGATGCAGTGGCAGTTTCAGCTGAGGTTGAAGCAGAGAAGCCAAATCCAACAATATTTCTTAAAGCATGTGAACTATTGGATGTAAAACCTGAGGATGCTGTTCATGTTGGGGATGATCGTAGAAATGATATATGGGGTGCCAGAGATGCAGGCTGTGATGCTTGGCTTTGGGGAAGTGATGTTCACTCCTTTAAGGAGGTAGCACAGAGGATTGGGGTCCAGGTCTGA 807 0.4449 MAFRVLGSKLRPLAAVHKWWRFPYSSAAVAESTREVMGLKDYADYRRSLYGQITHKALLVDAVGTLVIPSQPMAQIYREIGEKYGVKYSEDEILCRYRRAYGQPWGKSRLRYVNDGRPFWQYIVSYSTGCSDSQYFEELYKYYMTDKAWHLCDPDAEEVFKAVRKSGVKLAVVSNFDTRLRPLLRALKCDNWFDAVAVSAEVEAEKPNPTIFLKACELLDVKPEDAVHVGDDRRNDIWGARDAGCDAWLWGSDVHSFKEVAQRIGVQV* 269
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g02739 268 Pfam Haloacid dehalogenase-like hydrolase 64 247 IPR041492 -
Rops8g02739 268 NCBIfam HAD-IA family hydrolase 163 244 IPR006439 -
Rops8g02739 268 PANTHER - 22 267 - -
Rops8g02739 268 CDD HAD_dREG-2_like 156 267 - -
Rops8g02739 268 Gene3D - 60 252 IPR023214 -
Rops8g02739 268 NCBIfam HAD hydrolase, REG-2-like, family IA 56 249 IPR011949 -
Rops8g02739 268 NCBIfam HAD-IA family hydrolase 145 246 IPR006439 -
Rops8g02739 268 SUPERFAMILY HAD-like 56 259 IPR036412 -
Rops8g02739 268 Gene3D - 71 144 IPR044924 -
Rops8g02739 268 SFLD C1.5: HAD, Beta-PGM, Phosphatase Like 56 250 - -
Rops8g02739 268 PRINTS Haloacid dehalogenase/epoxide hydrolase family signature 193 209 IPR006439 -
Rops8g02739 268 PRINTS Haloacid dehalogenase/epoxide hydrolase family signature 211 231 IPR006439 -
Rops8g02739 268 PRINTS Haloacid dehalogenase/epoxide hydrolase family signature 55 66 IPR006439 -
Rops8g02739 268 PRINTS Haloacid dehalogenase/epoxide hydrolase family signature 163 176 IPR006439 -
Rops8g02739 268 SFLD Haloacid Dehalogenase 56 250 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g02739 Rops-Chr8 61877862 61882039 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g02739 - - pvu:PHAVU_001G126300g 462.611
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops8g02739 8 61877862 61882039 Rops8g02739 8 61877862 61882039 ECH