Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g02734 ATGTCTGCTGCACATAGTTGTTACCAGTGTATTGTGAAGATATCCAATATGTCAAGTAGATCAGAGAGACCAGTTTCTTTTCAAGATATTCACCTGGTGCGAAATCTCATCGAATGTTGTCTTCAACAATGCATGAGCAAGGAAGAAGTTGTGAACACACTACTAACTCGAGCAGAAATAGATCCTGAATTCACCAAACTAGTTTGGCGAAAGCTTGAAGAAGAAAATGAAGAGTTCTTCCGGGCTTATTATTCAAGATTGAAGTTGAACCAGCAAATAATACAATTCAACAAACTATTGGAGAAACAAAAGAAACTAATGGACATGTTACTGGAGAAACAAAAGCAACTAATGGACTTAGAAAAATTACGGCGAGAATTGGACTTTAGAGGAATCATGGTTTAA 405 0.3654 MSAAHSCYQCIVKISNMSSRSERPVSFQDIHLVRNLIECCLQQCMSKEEVVNTLLTRAEIDPEFTKLVWRKLEEENEEFFRAYYSRLKLNQQIIQFNKLLEKQKKLMDMLLEKQKQLMDLEKLRRELDFRGIMV* 135
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g02734 134 Pfam Plant protein 1589 of unknown function (A_thal_3526) 33 84 IPR006476 -
Rops8g02734 134 Coils Coil 106 126 - -
Rops8g02734 134 PANTHER OS02G0137100 PROTEIN 28 108 IPR006476 -
Rops8g02734 134 NCBIfam TIGR01589 domain 30 85 IPR006476 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g02734 Rops-Chr8 61726428 61729756 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g02734 - - gmx:100787548 123.25
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops8g02734 8 61726428 61729756 Rops8g02734 8 61726428 61729756 ECH