Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g02728 ATGGAAGAGAATGGTGATGAGAGAGAGAGGGAGGAAGAAGTAGGAGGAAGGTGTTTGATTCCTATGAGGGATGATGGGAGCATAGAGAGTCACAGATACTACTTGTCTCGCAGAACCATACTTGAGATGCTCAAAGACAGAGGCTACTCCATACCCTCTTCTGATATTCAACTCTCTCTCTCTGAATTCCGTGCCATTCATGGCCAATCTCCCGACGTTGACCGTCTCCGTTTGTCAGCCACTCATAGCTCTGACCCTTCCAAAAGGATTCTAGTCATTTTCTGTGGGCCTGGCATTGTCAAAGTTAATGTCATCAGGAACATTGCAGGGCAGATTGTCAATAAAGACACCTTGACTGGTCTTATATTGATAGTGCAAAATCAAATTACTAGCCAGGCTTTGAAAGCAGTGAATCTTTTCTCATTCAAGGTTGAAATATTCCAGATCACAGACTTGCTTGTTAATATTACAAAGCATGTATTGAAGCCAAAGCATCAGGTGCTGACTGATCGACAGAAACAAAATCTCCTGAAGAAGTACAATATAGAAGAAAAGCAGCTTCCGCGTATGCTTCAGACAGATGCGATTGCACGATATTATGGACTTGAGAGGGGACAAGTAGTTAAAGTGACCTACAGCGGTGAAATCACCCAGATGCATGTCACATATCGATGTGTTTGGTGA 684 0.4313 MEENGDEREREEEVGGRCLIPMRDDGSIESHRYYLSRRTILEMLKDRGYSIPSSDIQLSLSEFRAIHGQSPDVDRLRLSATHSSDPSKRILVIFCGPGIVKVNVIRNIAGQIVNKDTLTGLILIVQNQITSQALKAVNLFSFKVEIFQITDLLVNITKHVLKPKHQVLTDRQKQNLLKKYNIEEKQLPRMLQTDAIARYYGLERGQVVKVTYSGEITQMHVTYRCVW* 228
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g02728 227 PIRSF RPB5 22 227 IPR014381 GO:0003899
Rops8g02728 227 Gene3D - 24 151 IPR036710 GO:0003677|GO:0003899|GO:0006351
Rops8g02728 227 Gene3D - 152 227 IPR035913 -
Rops8g02728 227 Pfam RNA polymerase Rpb5, C-terminal domain 154 226 IPR000783 GO:0003677|GO:0003899|GO:0006351
Rops8g02728 227 SUPERFAMILY RPB5-like RNA polymerase subunit 152 227 IPR035913 -
Rops8g02728 227 PANTHER DNA-DIRECTED RNA POLYMERASES I, II, AND III SUBUNIT RPABC1 28 227 IPR014381 GO:0003899
Rops8g02728 227 FunFam DNA-directed RNA polymerases I, II, and III subunit RPABC1 152 227 - -
Rops8g02728 227 SUPERFAMILY Eukaryotic RPB5 N-terminal domain 27 155 IPR036710 GO:0003677|GO:0003899|GO:0006351
Rops8g02728 227 Pfam RNA polymerase Rpb5, N-terminal domain 29 111 IPR005571 GO:0003677|GO:0003899|GO:0006351
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g02728 Rops-Chr8 61613612 61616525 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g02728 K03013 - gmx:100306033 366.311
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops8g02728 8 61613612 61616525 Rops8g02728 8 61613612 61616525 ECH