Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g02724 ATGATAACTATGGATACTTTGCTCAAAACACCAAACAAGCTTGAATTTTTGCACCCACTTCACGGTTATTCAGAAAAATTGAACAATTCAGGCTCCTTTAAGTTGCAAAACCAGGAGCTTAGATTTGGTTCCAAGAAACAACAGGTGAAGTGGGGTAAATGTGGTGGTTTGAGGGCTAGTAGCAGTGCCCTTTTGGAGCTTGTTCCGGAATTTAAGAAGGAGAATCTGGATTTTGAGCTTCCTTTGTATGATTCATCAAAGGGAGCTGTTGTGGACCTTGCAGTTGTAGGAGGAGGCCCTGCAGGGCTTGCAGTGGCACAGCAGGTTTCTGAGGCAGGGCTTTCAGTTTGTGCAATTGACCCAAACCCCAGATTAATTTGGCCCAATAATTATGGTGTTTGGGTGGATGAATTTGAAGCCATGGATTTACTTGATTGCCTTGACACTACTTGGTCTGGTGCTGTTGTATTCATTGATGATAAAACTAAAAAGGATCTAGATAGACCTTATGGTAGGGTCAATAGGAAGCTGCTGAAGTCAAAGATGCTACAAAAATGCATATCAAATGGTGTCAAGTTTCACCAAGCTAAAGTTATCAAGGTTATTCATGAGGATTCCAAATCTTTGCTGATTTGTAATGATGGTGTCACTGTTCAGGCTACTGTGGTTCTCGATGCAACTGGTTTTTCAAGATGCCTTGTTCAGTATGATAAACCATACAATCCAGGTTACCAAGTTGCTTATGGGATTTTGGCCGAGGTTGAGGAACACCCGTTTGATGTAAATAAAATGCTTTTTATGGACTGGAGAGATTCACATCTGGACAATGACATGGAGCTGAAAGAGAGAAATAGCAGAATACCCACCTTTCTATATGCAATGCCCTTTTCATCTAACAGGATATTTCTTGAAGAAACTTCTCTTGTTGCACGCCCTGGGTTGCGTATGGATGATATACAGGAAAGAATGGTTGCTAGGTTGAAACACTTGGGCATTAAAGTGAAAAGCATTGAAGAAGATGAGCACTGTGTCATTCCCATGGGTGGCCCCCTCCCAGTTCTCCCCCAAAGAGTTGTTGGAATTGGTGGTACTGCTGGGATGGTGCATCCTTCAACTGGGTATATGGTAGCAAGGACCCTAGCTGCAGCTCCTATTGTTGCTAATTCTATTGTTCAGTGCCTTGGTTCTGATAGAGGTCTTTCAGGAGATGAAATATCTGCACAAGTATGGAAAGATTTATGGCCCATCCAAAGGAGGCGACAAAGAGAGTTCTTCTGTTTTGGTATGGACATCTTACTCAAGCTTGATTTACCTGGCACAAGGAGATTTTTTGATGCATTTTTTGATCTGGAACCTCGTTATTGGCATGGATTCTTGTCATCAAGACTGTTTCTTCCTGAGCTCATATTTTTTGGACTCTCTCTATTTTCTTATGCTTCTAATACATCTAGGATAGAGATTATGGCAAAGGGAACTCTTCCTTTGGTAAATATGATCAACAACTTGATAAAAGATACAGAATAA 1524 0.4127 MITMDTLLKTPNKLEFLHPLHGYSEKLNNSGSFKLQNQELRFGSKKQQVKWGKCGGLRASSSALLELVPEFKKENLDFELPLYDSSKGAVVDLAVVGGGPAGLAVAQQVSEAGLSVCAIDPNPRLIWPNNYGVWVDEFEAMDLLDCLDTTWSGAVVFIDDKTKKDLDRPYGRVNRKLLKSKMLQKCISNGVKFHQAKVIKVIHEDSKSLLICNDGVTVQATVVLDATGFSRCLVQYDKPYNPGYQVAYGILAEVEEHPFDVNKMLFMDWRDSHLDNDMELKERNSRIPTFLYAMPFSSNRIFLEETSLVARPGLRMDDIQERMVARLKHLGIKVKSIEEDEHCVIPMGGPLPVLPQRVVGIGGTAGMVHPSTGYMVARTLAAAPIVANSIVQCLGSDRGLSGDEISAQVWKDLWPIQRRRQREFFCFGMDILLKLDLPGTRRFFDAFFDLEPRYWHGFLSSRLFLPELIFFGLSLFSYASNTSRIEIMAKGTLPLVNMINNLIKDTE* 508
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g02724 507 Gene3D - 89 435 IPR036188 -
Rops8g02724 507 Pfam Lycopene cyclase protein 92 484 - -
Rops8g02724 507 FunFam lycopene epsilon cyclase, chloroplastic 88 426 - -
Rops8g02724 507 NCBIfam lycopene cyclase family protein 92 487 IPR010108 GO:0016117|GO:0016705
Rops8g02724 507 SUPERFAMILY FAD/NAD(P)-binding domain 91 475 IPR036188 -
Rops8g02724 507 PANTHER - 54 502 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g02724 Rops-Chr8 61565694 61567577 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g02724 K06443 - gmx:100783830 950.658
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops8g02724 8 61565694 61567577 Rops8g02724 8 61565694 61567577 ECH