Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g02718 ATGATTGGTAAAGAAAGTGGTGTTTTGAAGGCATGGGAGGCCACGATGAGAAAGACACATGCAGTTGCCAAGAAACGTGCCAATAGTATATTTGGGTCAATATCTCTGGCACATACAGACGAAGACGAAAACGATAACTATGATGATGATGAAGATAATGGGAACGAGACATTTGAAATATACCTTGAAGAGAAGGTTCTCCCCAATGGTGATTACTATACTGGCCAATGGGCAGAGAACTTCCCACATGGATTTGGCAAATACCTGTGGACAGATGGGTGCATGTACGTTGGAGAATGGTCCAAAGGCAAAACTAAGGGAAAGGGTAGGTTCAGTTGGCCTTCTGGGGCTACTTATGAAGGGGAATTCAAGAGTGGTTTCATGGATGGGACAGGAACCTACACAGGGTGCAATGGAGAGACATATAAGGGGCAGTGGATGATGAATTTGAAGCAAGGTCAAGGTTTTAAGAGTTATGTCAATGGGGATTGGTATGAAGGTGAGTGGAGACGGGGTTTGCAAGATGGGCAAGGGAGATATGAGTGGAAGGATGGGAGCCATTATTATGGAGAATGGAGGAATGGGACTATTTGGGGTAAAGGGTCATTTGTTTGGGCTAATGGGAAAAGGTTTGATGGGTCTTGGGAAGATGGTTTGCCGAAAGGAAATGGAACTTTCAAATGGCCTGATGGAAGTTTATATGTGGGGAATTGGAGTAAAGATGGTAAAGATACGAATGGAACATACCATCCACCTGAGTCATCTGAGGAGGGTCCTTTTGATTGGGATCCTCAAGAATTGTACAATGAGTTGAGTGGGTATTCAGTTTGTCCAGGGGAGAAGGTTCAGGTTTTGCCATCTCACAAGAGACTTGCAGTTTGGAGGTCTACAAAGGGAGGGGATTGTGCTAAGCCTAGGAGAATGTCAGTGGATGGGAGGGTGAGTGTAAGTGTGGAGAAGCCAAGTGATAGATTGCATCTATGGGATGGCGGTGGTGGAACTCCAGAGGGTGATTCCAGTGGTGGTGCTAGAACTCCAACTATGGGGAGTGATCTGGGTGAAGATTTGATGGGTTTAAGTATAGATGATGCTAATGAAAGTGGGGCTCCACTACAACCTTTAAAAGCACCAAAGAAAGCAAAGAGGCAGGGAGAGACCATATGCAAAGGGCACAAAAATTATGAGCTCATGCTCAATTTGCAGCTGGGAATTAGACATTCTGTTGCAAGACCTGCTCCCACAGCATCACTTGATCTTAAGCCTTCAGCTTTTGATCCCAAAGAGAAAGTGTGGACGAGATTTCCACCCGAAGGATCCAAATATACTCCACCACATCCATCATGTGACTTTAAGTGGAAGGACTATTGCCCTGTAGTTTTTAGGACTCTTAGGAAGCTATTCAAGGTGGATCCAGCTGATTACATGTTATCCATATGTGGAAATGAAGCCCTTCGCGAACTTTGCTCTCCTGGAAAAAGTGGAAGTTTCTTTTACTTGACCAATGATGATCGTTACATGATTAAGACAATGAAGAAAGCTGAAGTGAAAGTTCTCTTGAGAATGCTTCCAGCCTATTACAATCATTTTCGAGAGTATGAAAATACTTTATTGATAAAGTATTATGGCCTGCATTGTGTAAAATTAAATGGACCTATTCAGAGGAAGGTTAGATTTATCATAATGGGCAACCTCTTCAGTTCTGAGTATGTCACTCATAGACGCTATGATTTGAAGGGTTCTTCACTAGGCCGTATGACAGATAAGCCTGAGACAGAGATTAGTGAAACCACTATCCTTAAAGATCTTGATCTGAATTTTATATTTCTACTGCAGAAATCTTGGTTTCAAGAGTTTTGCAGCCAAATTGATAGGGACTGTGAGCTTCTGGAACAGGAGGGAATTATGGACTATAGTCTGCTGGTAGGTATTCATTTCAATAATATATCACCAGAGGGGGATCTTATTCCTTCAGGAACTCGGACTCCTACTGGTGATTCAGAGAATGAAGGAAGTCCCAAATTTTCAAGCGAAGATACGGATCAAGTTCTTACTGATCCTTCCAGTACCATATTGGGTGAGAATATGCCAGCAAGGGTTGAAAGGACAGTGAGAAGAAGAAGAAGTGATTGTGAAATACAACTTGTAGGAGAACCAATTGGAGAGTTCTATGATGTGGTATTGTCTTTTGGTGTCATAGACATACTTCAAGATTATGACATCAGCAAGAAGCTTGAGCATGCCTACAAGTCAATTCAATATGACCCAACTTCAATATCAGCTGTTGATCCTAGACAATACTCAAGGCGTTTTCGTGATTTCATATTTAGAATATTTACCGAAGACTCTTGA 2349 0.4232 MIGKESGVLKAWEATMRKTHAVAKKRANSIFGSISLAHTDEDENDNYDDDEDNGNETFEIYLEEKVLPNGDYYTGQWAENFPHGFGKYLWTDGCMYVGEWSKGKTKGKGRFSWPSGATYEGEFKSGFMDGTGTYTGCNGETYKGQWMMNLKQGQGFKSYVNGDWYEGEWRRGLQDGQGRYEWKDGSHYYGEWRNGTIWGKGSFVWANGKRFDGSWEDGLPKGNGTFKWPDGSLYVGNWSKDGKDTNGTYHPPESSEEGPFDWDPQELYNELSGYSVCPGEKVQVLPSHKRLAVWRSTKGGDCAKPRRMSVDGRVSVSVEKPSDRLHLWDGGGGTPEGDSSGGARTPTMGSDLGEDLMGLSIDDANESGAPLQPLKAPKKAKRQGETICKGHKNYELMLNLQLGIRHSVARPAPTASLDLKPSAFDPKEKVWTRFPPEGSKYTPPHPSCDFKWKDYCPVVFRTLRKLFKVDPADYMLSICGNEALRELCSPGKSGSFFYLTNDDRYMIKTMKKAEVKVLLRMLPAYYNHFREYENTLLIKYYGLHCVKLNGPIQRKVRFIIMGNLFSSEYVTHRRYDLKGSSLGRMTDKPETEISETTILKDLDLNFIFLLQKSWFQEFCSQIDRDCELLEQEGIMDYSLLVGIHFNNISPEGDLIPSGTRTPTGDSENEGSPKFSSEDTDQVLTDPSSTILGENMPARVERTVRRRRSDCEIQLVGEPIGEFYDVVLSFGVIDILQDYDISKKLEHAYKSIQYDPTSISAVDPRQYSRRFRDFIFRIFTEDS* 783
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g02718 782 ProSiteProfiles Phosphatidylinositol phosphate kinase (PIPK) domain profile. 390 778 IPR002498 GO:0016307|GO:0046488
Rops8g02718 782 SUPERFAMILY SAICAR synthase-like 389 778 - -
Rops8g02718 782 SUPERFAMILY Histone H3 K4-specific methyltransferase SET7/9 N-terminal domain 160 261 - -
Rops8g02718 782 SMART PIPK_2 420 779 IPR002498 GO:0016307|GO:0046488
Rops8g02718 782 PIRSF PIP5K_plant 10 782 IPR017163 GO:0005524|GO:0016308
Rops8g02718 782 MobiDBLite consensus disorder prediction 323 351 - -
Rops8g02718 782 Pfam MORN repeat 165 186 IPR003409 -
Rops8g02718 782 Pfam MORN repeat 188 210 IPR003409 -
Rops8g02718 782 Pfam MORN repeat 211 232 IPR003409 -
Rops8g02718 782 Pfam MORN repeat 96 117 IPR003409 -
Rops8g02718 782 Pfam MORN repeat 119 140 IPR003409 -
Rops8g02718 782 Pfam MORN repeat 142 163 IPR003409 -
Rops8g02718 782 Pfam MORN repeat 73 95 IPR003409 -
Rops8g02718 782 Gene3D Phosphatidylinositol Phosphate Kinase II Beta 379 563 IPR027484 -
Rops8g02718 782 PANTHER PHOSPHATIDYLINOSITOL-4-PHOSPHATE 5-KINASE 82 779 IPR023610 -
Rops8g02718 782 SMART morn 186 207 IPR003409 -
Rops8g02718 782 SMART morn 232 253 IPR003409 -
Rops8g02718 782 SMART morn 209 230 IPR003409 -
Rops8g02718 782 SMART morn 163 184 IPR003409 -
Rops8g02718 782 SMART morn 140 161 IPR003409 -
Rops8g02718 782 SMART morn 71 92 IPR003409 -
Rops8g02718 782 SMART morn 94 115 IPR003409 -
Rops8g02718 782 SMART morn 117 138 IPR003409 -
Rops8g02718 782 Gene3D - 564 778 - -
Rops8g02718 782 SUPERFAMILY Histone H3 K4-specific methyltransferase SET7/9 N-terminal domain 68 185 - -
Rops8g02718 782 MobiDBLite consensus disorder prediction 244 263 - -
Rops8g02718 782 MobiDBLite consensus disorder prediction 652 687 - -
Rops8g02718 782 Gene3D - 190 258 - -
Rops8g02718 782 Gene3D - 46 102 - -
Rops8g02718 782 Gene3D - 103 150 - -
Rops8g02718 782 FunFam Phosphatidylinositol 4-phosphate 5-kinase 379 563 - -
Rops8g02718 782 CDD PIPKc_AtPIP5K_like 393 777 - -
Rops8g02718 782 FunFam Phosphatidylinositol 4-phosphate 5-kinase 103 147 - -
Rops8g02718 782 Pfam Phosphatidylinositol-4-phosphate 5-Kinase 479 776 IPR002498 GO:0016307|GO:0046488
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g02718 Rops-Chr8 61378475 61383057 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops8g02718 1 782 Acyl Lipid Metabolism Gene Families AT3G56960 66.204 0.0 1088
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g02718 K00889 - gmx:100808754 1343.56
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops8g02718 8 61378475 61383057 Rops8g02718 8 61378475 61383057 ECH