Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g02708 ATGGCAAACCTTAAGATAACCAAAAAGCACCATAAGCGTTTCAACAACCCTTTTCCTTCTTCTGCTCCAACCACCATCCCTTATGTTCAAGGCTCCCTATTCATCAAATCCAAAACAGTACCTGCTGATAAGACCTTCTCAATTGGCAATGATTTTCAGCTTTCTTGGTCCTCTAGCAATGGTGGGCACCTCTCAATTTCTCATCTTTCTCAGAAAACGAGACCAATCTGGTCTACCATTCCAGGACAGGCCTTTGTCTCAGCTGCAATGGTTGACACAGAGGTGGAAGAAAGTAGGGGATCCTTTCTTTTCAAAGATAGAGATGTTCATTTGATTTGCAATCACCAAACCATTGAGGATATTAGGATGATCAATCAATTTGATCATCATTTGGAATATGAAGTTGCAAGCTTTCCATCAGAAAATCCTGGATTGGACCAGAGAAATGATACGAAAGAGACCAAGCTTCCTACTTTGCTGATCACAGGAAGGCTTTTCAATATGACTAAGAAGAACAAAAGGTTTCAAAAGTATGGCATTCAAGCAAATATACAGTTTGAAGCAAAAGGACCCTCTGTGTATGCAAGGTATTGGGTTTTGTTTAATCAGAAAAAAAACCATGAGGTTGGATTTCAAGTGAAGATTGAGAAACCCAACTTCATCTCACGCAACAAGGTCTCTCCAGCTGCTTCTGGAATATACCGTGGCTTTAAGAGGAGGCTGAGTAATAGAAAAAAGAGGCTTGGTTGGTGTTGGTACCTTTCAAGGCCAAGAGGGTTTATCCTGGTTTCTTCTGTGGAGGAAGAAACAGGAGCCTTGGAAATCCCACAATCAAGAGAATTCAACAGAGTTTGGTTGACATATGCAAGTGATGAGGAGGAGAGGTTTTATGGTTTTGGGGAGCAGTTTTCTCACATGAATTTCAAAGGCAAAAGGGTGCCAATCTTTGTTCAAGAACAAGGTATTGGAAGAGGAGATCAACCTATTACTTTAGCTGCTAACTTGGTCAGTTACAGGGCAGGAGGTGATTGGAGTACAACTTATGCTCCTTCCCCATTCTACATGACATCAAAAATGAGGTCTCTCTACCTTGAAGGATATGATTACACCATCTTCGATCTTACAAGACTCGATAGAGTACAGATACAGATACACGGAAACTTGGTTGAAGGGAGGATATTGCATGGGAACTCACCTTGTGAACTGATTGAACGTTTCACAGAAACCATTGGAAGGTTACCTGAGCTTCCAGAGTGGATAGTATCTGGTGCTATAGTTGGAATGCAGGGTGGCACAGATGCTGTACGTCATATTTGGGATGAACTAAGGACTTATGATGTTCCTGTCTCAGCATTTTGGTTGCAGGATTGGGTAGGACAGAGAGAAACATTGATTGGTTCACAACTCTGGTGGAACTGGGAAGTGGATGCACAAAGATATTGGGGATGGAAGGAACTTATTAAAGATCTTAGCACTCAGCATATCACAGTTATGACTTATTGCAATCCCTGTCTAGCTCCGGTTGATGAGAAGCAAAACAAAAGAAGAAACCTATTTGGGGAGGCAAAACAGTTGGACATATTGGTGAAAGACAGTAATGGGAATCCATATATGGTTCCAAATACTGCTTTTGATGTTGGAATGCTAGATCTAACTCACCCAAAAACTGCAATTTGGTTCAAGCAGATTCTAAGAGAAATGGTGGATGATGGAGTTAGAGGATGGATGGCTGATTTTGGTGAAGGCCTTCCTGTTGATGCTGTTCTATATTCAGGTGAAGATCCTATTTCAGCTCACAATAGATACCCAGAACTATGGGCCCAAATCAACAGAGAGCTTGTGGAAGAATGGAAAAGTAACTCCTTGGACAAGGTGAAGGAAGACCAAGAAGAGGGCTTGGTTTTCTTCATGAGGGCTGGTTTTAGAAATAGCCCCAAGTGGGGGATGCTATTTTGGGAAGGAGACCAAATGGTCAGTTGGCAAACAAATGATGGAATAAAGAGTTCTGTTGTTGGCCTACTGAGCAGTGGAATTTCTGGCTATGCCTTTAATCACAGTGACATTGGAGGATATTGTACAGTAAACTTACCTATATTTAAATATAGAAGAAGTCAAGAATTGCTTTTGAGATGGATGGAGCTAAATTCTTTCACCACAGTCTTCCGCACCCATGAAGGAAACAAACCATCATGCAACAGCCAGTTTTACTCAAACCAACAAACTCTATCACATTTTGCACGCTCTGCAAAAATATACACAGCATGGAAATTTTACAGAATTCAACTGGTGAAGGAAGCAGCACAGAAAGGACTGCCTGTGTGCCGCCACCTATTTCTCCATTACCCTAATGATGAACGTGTGCATCACTTGAGTTATCAGCAGTTTTTGGTTGGTTCTGAGTTCCTGGTGGTGCCAGTCCTTGACAAAGGAAAGAAGAAAGTTAAAGCTTATTTTCCATTGGGAGAGAGTAGCAGTTGGCTACATATCTGGACAGGGAAAGTATTTTCCAAACAAGGAAGTGAAGAATGGGTAGAAGCTCCGATAGGATATCCTGCTGTATTTATTAAGGTCGGCTCCCAAATTGGAGAAACCTTTTTGAATAACCTAAGAAGTTTAGGCATTCTTTAA 2628 0.414 MANLKITKKHHKRFNNPFPSSAPTTIPYVQGSLFIKSKTVPADKTFSIGNDFQLSWSSSNGGHLSISHLSQKTRPIWSTIPGQAFVSAAMVDTEVEESRGSFLFKDRDVHLICNHQTIEDIRMINQFDHHLEYEVASFPSENPGLDQRNDTKETKLPTLLITGRLFNMTKKNKRFQKYGIQANIQFEAKGPSVYARYWVLFNQKKNHEVGFQVKIEKPNFISRNKVSPAASGIYRGFKRRLSNRKKRLGWCWYLSRPRGFILVSSVEEETGALEIPQSREFNRVWLTYASDEEERFYGFGEQFSHMNFKGKRVPIFVQEQGIGRGDQPITLAANLVSYRAGGDWSTTYAPSPFYMTSKMRSLYLEGYDYTIFDLTRLDRVQIQIHGNLVEGRILHGNSPCELIERFTETIGRLPELPEWIVSGAIVGMQGGTDAVRHIWDELRTYDVPVSAFWLQDWVGQRETLIGSQLWWNWEVDAQRYWGWKELIKDLSTQHITVMTYCNPCLAPVDEKQNKRRNLFGEAKQLDILVKDSNGNPYMVPNTAFDVGMLDLTHPKTAIWFKQILREMVDDGVRGWMADFGEGLPVDAVLYSGEDPISAHNRYPELWAQINRELVEEWKSNSLDKVKEDQEEGLVFFMRAGFRNSPKWGMLFWEGDQMVSWQTNDGIKSSVVGLLSSGISGYAFNHSDIGGYCTVNLPIFKYRRSQELLLRWMELNSFTTVFRTHEGNKPSCNSQFYSNQQTLSHFARSAKIYTAWKFYRIQLVKEAAQKGLPVCRHLFLHYPNDERVHHLSYQQFLVGSEFLVVPVLDKGKKKVKAYFPLGESSSWLHIWTGKVFSKQGSEEWVEAPIGYPAVFIKVGSQIGETFLNNLRSLGIL* 876
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g02708 875 Gene3D glycosyl hydrolase (family 31) 240 392 - -
Rops8g02708 875 Gene3D - 804 856 IPR013780 -
Rops8g02708 875 SUPERFAMILY Galactose mutarotase-like 272 399 IPR011013 GO:0003824|GO:0005975|GO:0030246
Rops8g02708 875 PANTHER SULFOQUINOVOSIDASE 1 874 - -
Rops8g02708 875 SUPERFAMILY Glycosyl hydrolase domain 772 856 - -
Rops8g02708 875 Gene3D Glycosidases 398 803 - -
Rops8g02708 875 SUPERFAMILY (Trans)glycosidases 402 770 IPR017853 -
Rops8g02708 875 Pfam Glycosyl hydrolases family 31 394 859 IPR000322 GO:0004553|GO:0005975
Rops8g02708 875 CDD GH31_N 281 411 - -
Rops8g02708 875 CDD GH31_glucosidase_YihQ 411 749 IPR044112 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops8g02708 292 855 Glycoside Hydrolase AT1G68560 23.659 1.77e-21 98.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g02708 - - gmx:100779005 1639.4
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops8g02708 8 61194421 61199574 Rops8g02708 8 61194421 61199574 ECH