Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g02702 ATGTCACCTGAGAAGAACTCGGTACCAAAATTGGAGAAGCAAGAAGATTGCAAGGTTTATTCTCTCTTGGATTTGCCTGAGTGGGCCTTGAATTGCATTCTTGAGCGCCTTTCACCTCAGGATTTGTGCATGATGGCACAAGTTTGTACTTGTTTGAGGAATAGAAGCAGAAGTGATGATTTGTGGGAGAAACAAGTCAACCAGAAATGGAGTAGACTTATTGGGGATGTTGCTAACCAAGAGTGGCTGTGGCATACAACAAAGATAAACACACAAAGTCTCTTATTACAGCAGAATCAGAGTGGATCATGTGGCTCTTTTAGTGGTGTTTGGCCTTCTCTAAACCTTCATTCTTATTTGGAAAATTTTAGGGACTTGATTAGTTTGTTTAAAAATTGTTCAAAATTGACTTTGTTTATCTGTCTTGAGAGTGGCCGCTTCTGGTTCCCTGTTCAAGTCTATAAGAGTGCACCGTTATACTGTTATGATGCCACTGTCAGCTATGACTCTAGAACAGATACCTTCCGGGCAAGGTCTCCAACTGGGGGTTGGCGAATGATTGAGGAAAATATTCAATGGGATAGGTTAAGATTATCATCAGTTGAGACTTTTCCAAGGGGCTTTTATACATCTAACTCTCTGAATGATTTGAAACCAGGAGATCATATCGAGATTCAGAGGAGAAAACGAAAAGAACTCCCTTATGATTGGTGGTATGCTGTAGTTGGTCATTTGGAATCCTGTGATGAGGACTTGAATCATTGTCGTTGCCAATATAATGACATGTTAGTGGTGGAGTTCAAGCAATACCACCTTGCAAATCGATGGAGAAGATCAGTACTGAACAGAAACGTGAATGAAGAACAGGGCTCTAGGCTTTGCTGGTTGGGAGGAATCAGAAAACTTGACAAGGAGGAGGAGATTGAAAAGTGGAATAGCCTCTTTTTATCTAGAAATCATCGACCATTCATACATGGACATGGACATCATTTTCAACCAATCATACATGGACAATTTACATGA 1023 0.4047 MSPEKNSVPKLEKQEDCKVYSLLDLPEWALNCILERLSPQDLCMMAQVCTCLRNRSRSDDLWEKQVNQKWSRLIGDVANQEWLWHTTKINTQSLLLQQNQSGSCGSFSGVWPSLNLHSYLENFRDLISLFKNCSKLTLFICLESGRFWFPVQVYKSAPLYCYDATVSYDSRTDTFRARSPTGGWRMIEENIQWDRLRLSSVETFPRGFYTSNSLNDLKPGDHIEIQRRKRKELPYDWWYAVVGHLESCDEDLNHCRCQYNDMLVVEFKQYHLANRWRRSVLNRNVNEEQGSRLCWLGGIRKLDKEEEIEKWNSLFLSRNHRPFIHGHGHHFQPIIHGQFT* 341
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g02702 340 Gene3D - 10 101 - -
Rops8g02702 340 SMART fbox_2 25 65 IPR001810 GO:0005515
Rops8g02702 340 Pfam F-box domain 23 64 IPR001810 GO:0005515
Rops8g02702 340 ProSiteProfiles F-box domain profile. 19 65 IPR001810 GO:0005515
Rops8g02702 340 SUPERFAMILY F-box domain 21 71 IPR036047 GO:0005515
Rops8g02702 340 PANTHER ESTS AU081301(E20138) 4 318 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g02702 Rops-Chr8 61119821 61121592 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g02702 - - gmx:100795992 487.263