Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g02701 ATGCTTTACTTCCTTATATCTTTTGTCTCCTTTGTCATCCTTTCCAAGTCCTTTACCAGTAAGCCAGGGGAGAGTGGGACAAAACTAGTGTCAACTGGGTTTTGGGGGAATCTCTCAAGTTTGCTAGTTTCTAGGCTAAGGATAGGAATCATTCCTTTTAGTTTTTTTCAGTTTTCTTTTGGTATGCCATTGAAAAAGAAGAGTTTAGTATCTAAAGTTGAGAATGGGGAAGAGGAAGCCAAGGTTTCTCTTTTGGATTTGCCTGATTTGCCATTGGAGTGTATCCTTGAGCACCTTTCACCAGTTGAATTATGCAATGTGGCAACAGTGTGCACATCTCTCAGGGATAGATGTAGAAGTGATTATTTATGGGAGAAGCACTTGAAGAGGAAATGGGGTAAAGTGATTGGTGATGCTGCTTATAGACAATGGAAATGGCATGTAGCTTCCAGAAACAAAGAGAAGACCTCTAATCAGCACAATCAGAAAGGAATATTTTCTTTCCTTCGTGGTTATCACCCCTTCCTATGGACTAAATCAAAATCAGAAAACGGCAGACAGTTAAGGAGCTCTTTACCTGATGATTCAATTGCTGCTCTATATCTTTCTCTTGAGAGTGGGAAATTTTGGTTCCCATCTCAAGTCTATAACCGTGAGAATGGTCATGCTGGGTTCATGCTCTCATGTTATGATGCCCAACTTTGCTATGACTCTAGAACTGACGCTTTTCAAGCAAGGTACTCACCTCATGGAAGATGGACAACTGAGGAAAACATACAATGGGACAGGCTGAGAGTGCCACCAATTGACTCTTCTCCACATGTTCTTCATATCTCTGACTGTTTGGATGACTTGAGGCCTGGAGATCATGTTGAGATCCAGTGGAGAAGAAACAAAGAGTTTCCTTATGGTTGGTGGTATAGTGTCATTGGTCATTTGGAAACATGCGAAGGGCTTGGGAGCCATTGCCATTGTCACAATAGTGATACAGTGATTTTGGAGTTCACCCAGTACACCGCTGGTTCCAGATGGAGACAAACCATGATAAACAGGAAGCATCATAGAGAACAAGGCAACGAAATTGAAGGTTTTTATGGGGGAATCAGGAAGCTACACAGCAAGGAGGAAATTACAAGGTGGAAGAACCTCTGGCCAACCAAAATTGTGGAATAG 1173 0.4194 MLYFLISFVSFVILSKSFTSKPGESGTKLVSTGFWGNLSSLLVSRLRIGIIPFSFFQFSFGMPLKKKSLVSKVENGEEEAKVSLLDLPDLPLECILEHLSPVELCNVATVCTSLRDRCRSDYLWEKHLKRKWGKVIGDAAYRQWKWHVASRNKEKTSNQHNQKGIFSFLRGYHPFLWTKSKSENGRQLRSSLPDDSIAALYLSLESGKFWFPSQVYNRENGHAGFMLSCYDAQLCYDSRTDAFQARYSPHGRWTTEENIQWDRLRVPPIDSSPHVLHISDCLDDLRPGDHVEIQWRRNKEFPYGWWYSVIGHLETCEGLGSHCHCHNSDTVILEFTQYTAGSRWRQTMINRKHHREQGNEIEGFYGGIRKLHSKEEITRWKNLWPTKIVE* 391
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g02701 390 Pfam F-box domain 84 126 IPR001810 GO:0005515
Rops8g02701 390 SUPERFAMILY F-box domain 84 153 IPR036047 GO:0005515
Rops8g02701 390 Gene3D - 68 160 - -
Rops8g02701 390 PANTHER ESTS AU081301(E20138) 1 389 - -
Rops8g02701 390 ProSiteProfiles F-box domain profile. 81 127 IPR001810 GO:0005515
Rops8g02701 390 SMART fbox_2 87 127 IPR001810 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g02701 Rops-Chr8 61095485 61098270 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g02701 - - gmx:100778469 689.493