Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g02700 ATGAACGGAGGCCCATCTGGTTTCACAAATGCTCCCGTTACGAGGGCTTTCGTCGTTGCCTCGGCGCTTTTCACAATCTTCTTCGGGATCCAGGGTCGTTTCAACACTTTGGGGTTGTCTTATCAGGATTTTTTTGGAAAGCTTCACCTTTGGAAGTTGATTATGTCGATATTTTCCTTCTCATCAACACCAGAGTTGATGTTTGGACTGTATCTGCTATATTATTTCAGGGTCTTTGAGAGACAAATAGGTTCCAATAAATACTCAGTCTTTATTGTGTTCTCCATATTAACATCACTACTGTTTGAGGTGCTTGCTGTAGCACTTTTAAAAGATCCTACAGCAAACCTAGTCACTCCTGGACCTTATGGTCTTATATTTGCTTCATTTATACCCTTTTTCTTTGACATTCCAGTTTCAACACGGTTCCATGTATTTGGTTTCCACTTCTCAGATAAGTCATTCATATATCTAGCTGGTCTTCAGCTTCTTTTGTCATCATGGAAAAGGTCCATCTTACCAGGGATATGTGGCATCCTTGCTGGTTCCTTATACCGTTTGAATGTCTTTTACATCCGGAAAGCAAAGTTCCCAGAGTTCATCTCGTCATTCTTCTCACGAATTTCATTGCCATCTATGGGGAGTCCACGTGCAGCATCAACAAGGAATGTTGTGGGGAATGTCCCATCCTACCCAGCTCGCCAAATGGAGAGAAACTATCCCGCTCCAATGCAATCTGCAGTAGAACCGTCAGAGGACTCTATCATGACCCTTGTTTCAATGGGCTTTGACAGGAATTCTGCCAGACAAGCCCTAGTGCAGGCCAGAAATGATGTCAATGTGGCAACAAACATCCTACTAGAGGCACAGTCCCACTCATGA 882 0.4331 MNGGPSGFTNAPVTRAFVVASALFTIFFGIQGRFNTLGLSYQDFFGKLHLWKLIMSIFSFSSTPELMFGLYLLYYFRVFERQIGSNKYSVFIVFSILTSLLFEVLAVALLKDPTANLVTPGPYGLIFASFIPFFFDIPVSTRFHVFGFHFSDKSFIYLAGLQLLLSSWKRSILPGICGILAGSLYRLNVFYIRKAKFPEFISSFFSRISLPSMGSPRAASTRNVVGNVPSYPARQMERNYPAPMQSAVEPSEDSIMTLVSMGFDRNSARQALVQARNDVNVATNILLEAQSHS* 294
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g02700 293 Gene3D - 9 188 IPR035952 -
Rops8g02700 293 SUPERFAMILY Rhomboid-like 9 194 IPR035952 -
Rops8g02700 293 SUPERFAMILY UBA-like 244 289 IPR009060 GO:0005515
Rops8g02700 293 Pfam UBA/TS-N domain 251 286 IPR015940 -
Rops8g02700 293 Gene3D - 218 293 - -
Rops8g02700 293 ProSiteProfiles Ubiquitin-associated domain (UBA) profile. 249 289 IPR015940 -
Rops8g02700 293 SMART uba_6 251 288 IPR015940 -
Rops8g02700 293 Pfam Rhomboid family 49 189 IPR022764 GO:0004252|GO:0016020
Rops8g02700 293 PANTHER RHOMBOID-RELATED PROTEIN 3 237 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g02700 K25216 - gmx:100805217 535.413
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops8g02700 8 61056917 61065434 Rops8g02700 8 61056917 61065434 ECH