Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g02691 ATGTCATCAAGAGCTGGTTCTGGTGGGTCTCGTGGCAGCGGTAATGGGGCTGGTCGTGTCCCTGTGAGTGGAGGATCTAGGTTGAAGCATCATTTGGGAGGAAGGCGTAAGGATGTTGGAGTCTACAAAGCTGTCTGTGAGGAAGTCCAGGATGAAATGTGGGAAATTGTATCCTCATTGCCGGAAAGGCTAGTTAAGAAGACGAGAGAGGAATTCACAAACGCAAGAGAACTTAGAAATGCATTTGACAAATACAATATTAAAGGTCTGTCTCGATGCCTGAATCGGACTTCACGGCCAAATGATAATTGTCATGCTGTCTGCTATGTGGTAAATCATCATTTTACATCGGATCGCAATGGTAGATGCACAAAGGAGTTCTCAAGTAAGCTTCTTAAAAGTATTCCAGAATTTGTAAAGATAGTGGAGGTTGGTCCAAGGGATGGGTTGCAGAATGAGAAGGTTATTGTCCCAACTGATGTAAAAGTTGAATTGATAAAACTGCTAGTTTCTTCTGGGTTGTCTGTTGTTGAGGCAACAAGTTTTGTCTCACCAAAATGGGTACCACAGTTGGCAGATGCAAAAGATGTATTGGCAGCAATTCAAAATGTTGAAGGTGCTAGCTTTCCTGTCTTAACTCCAAATCTCAAAGGCTTTGAGGCAGCTGTTGCTGCTGGAGCTAAGGAAGTGGCTGTTTTTCCTGCAGCTTCAGAATCATTCTCTAAAGCAAATCTCAATTGTGGCATTGAGGATAATCTTGCTCGTTGCCGTGATATTGCTTTAGCTTCTAGAAGCCTCTTGATCCCAGTTCGTGGATATATATCGTGTGCTGTGGGATGTCCTCTGGAAGGAAAAATTGCTCCTGCAAAAGTGGCATATGTGGCAAAATCACTTTATGAGATGGGTTGCTCGGAGATTTCACTAGGGGATACAATTGGTGTTGGTACCCCTGGTACAGTCATTCCAATGCTTGAAGCAGTTCTTGATGTTGTTCCGATTGACAAGCTTGCTGTCCACTTTCACGATACTTACGGTCAGGCACTTTCAAATACTCTAATTTCACTGCAGATGGGGATCAGCACAGTGGATTCATCTGTCTCCGGTCTTGGAGGTTGTCCATATGCTAAGGGTGCAACTGGGAATGTTGCCACTGAGGATGTTGTTTACATGCTGAATGGACTTGGAGTGAAAACCAATGTGGACCTTGGAAAACTTATGCTAGCTGGGGATTTCATCTGCAAGCATTTAGGACGTGCATCTGGTTCAAAAGCTGCAACTGCCTTGAATAAAGTTACAAATCATGCCTCCAAACTGTGA 1317 0.4381 MSSRAGSGGSRGSGNGAGRVPVSGGSRLKHHLGGRRKDVGVYKAVCEEVQDEMWEIVSSLPERLVKKTREEFTNARELRNAFDKYNIKGLSRCLNRTSRPNDNCHAVCYVVNHHFTSDRNGRCTKEFSSKLLKSIPEFVKIVEVGPRDGLQNEKVIVPTDVKVELIKLLVSSGLSVVEATSFVSPKWVPQLADAKDVLAAIQNVEGASFPVLTPNLKGFEAAVAAGAKEVAVFPAASESFSKANLNCGIEDNLARCRDIALASRSLLIPVRGYISCAVGCPLEGKIAPAKVAYVAKSLYEMGCSEISLGDTIGVGTPGTVIPMLEAVLDVVPIDKLAVHFHDTYGQALSNTLISLQMGISTVDSSVSGLGGCPYAKGATGNVATEDVVYMLNGLGVKTNVDLGKLMLAGDFICKHLGRASGSKAATALNKVTNHASKL* 439
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g02691 438 CDD DRE_TIM_HMGL 141 414 - -
Rops8g02691 438 MobiDBLite consensus disorder prediction 1 31 - -
Rops8g02691 438 ProSiteProfiles Pyruvate carboxyltransferase domain. 139 406 IPR000891 GO:0003824
Rops8g02691 438 FunFam Hydroxymethylglutaryl-CoA lyase, mitochondrial 133 431 - -
Rops8g02691 438 Gene3D Aldolase class I 132 431 IPR013785 -
Rops8g02691 438 Pfam HMGL-like 139 411 IPR000891 GO:0003824
Rops8g02691 438 PANTHER HYDROXYMETHYLGLUTARYL-COA LYASE 120 432 IPR043594 GO:0016833
Rops8g02691 438 SUPERFAMILY Aldolase 134 429 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g02691 Rops-Chr8 60915736 60928549 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g02691 K01640 - gmx:100801507 635.18
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops8g02691 8 60915736 60928549 Rops8g02691 8 60915736 60928549 ECH