Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g02672 ATGGATTCATCCAACGATGCTTCTTCTGGGTTCAAAGATAAGGAGTCAATGGTTGACCCCTTCTTGGTTGAGGCTCTTCAGAACCCTCGTCACCGTCTCACCATTTTGCGGATGGAGCTGGATATCCAGAGGTTCATGAATAATGCTGATCAGCAGTATGTTGAGTTCCAACATTACCCTTCTTCCTATCTCCGACTGGCTGCACACCGTGTTGCTCAACACTACGGCATGCAAACCATGGTTCAAGATAATGGTGTCTTAGATGGCCAGGGAAGTGAAATTCTGGTGAGAAAGTTAGTAGAAAGCAAGTATCCTGTGGTTCGCTTATCAGAAATACCTGCTAAACAGTTAGAAAACGATAAACTTGAACAGAAAAAAATTGTCATTAGACCTAGGCCTAATAAAACTGGTTTGAATGGAGCCAATGAAGCTGGGAGAAAAGGAAACCATCTGAGAAGTGTGGAAGAGAGGAAGGAGGAATATGATCGTGCACGGGCCCGTATCTTTAGTGGCTCTAGAAGCTCTGATTCAGGTGATGCCCCATTTGTGGTTCCAAGGGATGGGAAAAAATCTTTTATGAGCAAGGATGAAAATGAAACTAGCAAAAACCCCATGGCCGATTCAGAAAGATGTGTTAGTGTCAGGGATACTAGTTTCACTCGAGTTGCCATTTTCAGGGATAGGGAAAAGGATCGAAGTGATCCGGATTATGATCGTAGCTATGGAAGGTATGCTAGGAGTACTTCAACCGCTGCCATTAACTTGGTGCCTTTTAATTTACAAAATGCTCAACCTTCATTTGCTCAGTATGATACTACTTTTAACCAGTTGGGTCAGATGCCACAAACTCAGGCTTCACTTGGCTATGGACCACCTTCAAGCCCGATAATGAGTCCTTTTGGTACCGCAGGATTGAATCAGACATCTAGGGATGGTGCTTACCTGCAGTGGCCGAGTGCTTCAATGATGTATGCACATTCATATGACCAATTTAGACATGCTGTTTACCAGGCTCCATTTGGTCAGCAGCCATTAAGCTTTGACTATTCACAGAACTACTAG 1062 0.4388 MDSSNDASSGFKDKESMVDPFLVEALQNPRHRLTILRMELDIQRFMNNADQQYVEFQHYPSSYLRLAAHRVAQHYGMQTMVQDNGVLDGQGSEILVRKLVESKYPVVRLSEIPAKQLENDKLEQKKIVIRPRPNKTGLNGANEAGRKGNHLRSVEERKEEYDRARARIFSGSRSSDSGDAPFVVPRDGKKSFMSKDENETSKNPMADSERCVSVRDTSFTRVAIFRDREKDRSDPDYDRSYGRYARSTSTAAINLVPFNLQNAQPSFAQYDTTFNQLGQMPQTQASLGYGPPSSPIMSPFGTAGLNQTSRDGAYLQWPSASMMYAHSYDQFRHAVYQAPFGQQPLSFDYSQNY* 354
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g02672 353 Gene3D - 7 133 IPR036867 GO:0003676
Rops8g02672 353 PANTHER CAMP-REGULATED PHOSPHOPROTEIN 21 RELATED R3H DOMAIN CONTAINING PROTEIN 14 340 - -
Rops8g02672 353 MobiDBLite consensus disorder prediction 171 209 - -
Rops8g02672 353 MobiDBLite consensus disorder prediction 132 158 - -
Rops8g02672 353 Pfam SUZ domain 123 172 IPR024771 -
Rops8g02672 353 CDD R3H_encore_like 31 98 - -
Rops8g02672 353 SUPERFAMILY R3H domain 6 122 IPR036867 GO:0003676
Rops8g02672 353 ProSiteProfiles SUZ domain profile. 103 173 IPR024771 -
Rops8g02672 353 ProSiteProfiles R3H domain profile. 32 100 IPR001374 GO:0003676
Rops8g02672 353 SMART R3H_4 16 99 IPR001374 GO:0003676
Rops8g02672 353 Pfam R3H domain 34 85 IPR001374 GO:0003676
Rops8g02672 353 MobiDBLite consensus disorder prediction 189 204 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g02672 Rops-Chr8 60553128 60558284 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g02672 - - gmx:100796710 590.497
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops8g02672 8 60553128 60558284 Rops8g02672 8 60553128 60558284 ECH