Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g02649 ATGGTGAATCCGGGATTGCTTTCTGGGAATAAGTCTGTGAATTCAGTGAAGGTAAGCTTTAGGATACCATATTTTACCGAATGGGGTCAGAGCTTGTTGGTCTGTGGCTCTGTACCAGTGCTGGGATCTTGGAATGTGAAGAAGGGTGTGTTGCTCAGCCCCATTCATCAAGGGTCTGAGCTCATTTGGAGTGGAAGCATCACAGTGCCAAAAGGGTTCCAATGCCAGTACAGCTATTATGTTGTTGATGATAACAAAAATGTTCTGAGATGGGAGATGGGGAAGAGGCGCGAATTGGTACTCCCTGAAGGTATTCAGAGTGGCCAGGAGATTGAGTTCCGTGATCTTTGGCAGACTGGCTCAGATGCTCTCCCTTTCAGAAGTGCTTTCAGAGATGTCATTTTTCGGCGAAGCTGGGATTTGAGCATCGAGACGACCACAGGAGTCAACCACATTAATTTTGAACCAGAAGCTGGATCTGTCGTCATCCAATTCAAAATTTTCTGCCCAAATATTGAGAAAGACACATCAATATATGTGATTGGTAGCAATACAAAGTTGGGGCAGTGGAAAGCTGAAAATGGACTAAAACTCAACTATTTTGGCGAATCTGTCTGGCTAGTTGAATGTGTGATGCAAAGGAGTGATTTTCCAATAAAATATAGATATTGCAAATACAGCAGGTCTGGAAACTTTTCTATAGAAAATGGTCCAAATCGAGAAGTCTCCATTAACTCTTCAAGCAATGAGGTGAAATATATTTTTCTTTCGGATGGCATGATGCGGGAAACGCCTTGGCATGGTGCTGGTGTAGCAATTCCTATGTTCTCTGTTAGGTCGGAATCTGATTTAGGAGTCGGAGAGTTTCTTGACCTTAAATTACTAGTTGACTGGGCTGTAGCATCGGGTTTCCATTTAGTTCAACTTTTACCAATCAATGATACATCGGTGAATATGATGTGGTGGGATTCTTATCCATACAGTTCACTCTCGGTATTCGCATTGCATCCATTGTACCTGAGAGTACAGGCACTTTCTGATAACATACCGGAGGAGATCAAGCAAGAGATTGAGAGGGCAAAACAGCAATTGGATGGGAAGGATGTTGATTATGAAGCTACAATGGCTACTAAACTCTCAATTGCTAAGAAGGTTTTCACTCTAGAGAAAGATTTGATACTCAGTTCGAGTTCCTTTCAGGAGTTCTTTTCTGAGAATGAGGGTTGGTTGAAACCCTATGCTGCCTTCTGTTTCCTGCGGGACTTTTTTGAAACATCGGATCGCAGTCAATGGGGTCGTTTTGCTCATTATTCGGAAGATAAGCTGGAGAAACTTGTATCCAAGGAAAGCCTGCATTACAAGATAATTTGCTTCCACTACTATGTTCAATACCATCTACATTTACAATTATCAGAAGCTGCAGAATATGCAAGAAAGAAGGGAGTGATACTAAAGGGAGATCTTCCTATTGGAGTTGACAGAAACAGTGTGGATACCTGGGTCTATCCAAATTTGTTCCGAATGAACACTTCTACTGGGGCACCTCCTGATTATTTTGATAAAAATGGGCAGAATTGGGGCTTTCCTACTTATAATTGGGAAGAAATGTCAAAAGACAACTATGCTTGGTGGCGAGCTCGATTGACACAGATGGGAAAATATTTTACGGCTTACAGGATTGATCACATATTGGGATTCTTCCGAATCTGGGAACTTCCAGATCACGCTGTGACAGGTCTAGTTGGAAAATTCCGACCATCGATTCCTCTAAGTCAGGAAGAACTTGAAAGAGAAGGAATATGGGACTTTAATCGCCTGAGTCGCCCATATATTAGGCAGGAAATATTACAGGAAAAATTCGGATCTGCTTGGACATTTATTGCAACAACTTTTCTGAATGAATATGACAAGAACTGCTATGAGTTCAAGGAGGATAGCAACACCGAGAAAAAAATTGCTTCCAAACTGAAAACTTGCACAGAAAGTTCCCTCTTGTTGGAGAGTGAAGAGAAACTCCGGCGCAATCTCTTCGATCTTTCACAGAATATAGTTCTAATCCAAGATCCAGAGGATCCAAGAAAATTTTATCCTCGTTTCAACCTTGAAGATACCTCAAGTTTTCAGAATTTGGATGATCATAGCAAGAATGTTCTCAAAAGATTATACTATGACTACTATTTCCAACGGCAAGAGAATCTTTGGAGGCAAAATGCGTTGAAGACCCTGCCTGCACTTCTAAATTCATCAGAGATGCTGGCCTGCGGGGAAGATCTGGGCCTCATTCCATCCTGTGTCCATCCTGTTATGCAAGAACTGGGATTAGTTGGATTGCGCATTCAGCGCATGCCCAACGAACCTGGTCTGGAATTTGGTATTCCTTCTCAATACAGCTACATGACAGTATGTGCCCCATCATGTCATGACTGTTCCACCTTGCGTGCTTGGTGGGAAGAAGATGAAGAAAGAAGACAACGGTTTTTCAAGAATGTGGTGGAGTCTAACGAGTTGCCACCCGATCGATGTGATCCAGAAGTTGCACATTTTATTATAAGACAACATGTTGAAGCACCATCAATGTGGGCAATTTTCCCTCTTCAGGACTTGTTAGCATTAAAAGAAGAATATACAACACGCCCTGCAACAGAGGAGACAATCAACGACCCTACAAATCCGAAGCACTATTGGAGATACCGTGTACATGTGACTCTGGAATCATTGAACAAGGATAATGAACTCAAAACTATCATCAAAGATCTTGTACGTTGGGGTGGAAGATCACTTCCTCTAGAGGAATCACAAGTTGAAGCATCATCATCATCAGTAGCAGAAACTGTCTCTGAGAAGCTGCAGTTTGCCAGTGCTGTGGAAAAGATTCGCCTTCCTTCTGAATCTAATGGAGTTCCAACAAAGGATCCTGTGACTGTTCGTTGA 2931 0.422 MVNPGLLSGNKSVNSVKVSFRIPYFTEWGQSLLVCGSVPVLGSWNVKKGVLLSPIHQGSELIWSGSITVPKGFQCQYSYYVVDDNKNVLRWEMGKRRELVLPEGIQSGQEIEFRDLWQTGSDALPFRSAFRDVIFRRSWDLSIETTTGVNHINFEPEAGSVVIQFKIFCPNIEKDTSIYVIGSNTKLGQWKAENGLKLNYFGESVWLVECVMQRSDFPIKYRYCKYSRSGNFSIENGPNREVSINSSSNEVKYIFLSDGMMRETPWHGAGVAIPMFSVRSESDLGVGEFLDLKLLVDWAVASGFHLVQLLPINDTSVNMMWWDSYPYSSLSVFALHPLYLRVQALSDNIPEEIKQEIERAKQQLDGKDVDYEATMATKLSIAKKVFTLEKDLILSSSSFQEFFSENEGWLKPYAAFCFLRDFFETSDRSQWGRFAHYSEDKLEKLVSKESLHYKIICFHYYVQYHLHLQLSEAAEYARKKGVILKGDLPIGVDRNSVDTWVYPNLFRMNTSTGAPPDYFDKNGQNWGFPTYNWEEMSKDNYAWWRARLTQMGKYFTAYRIDHILGFFRIWELPDHAVTGLVGKFRPSIPLSQEELEREGIWDFNRLSRPYIRQEILQEKFGSAWTFIATTFLNEYDKNCYEFKEDSNTEKKIASKLKTCTESSLLLESEEKLRRNLFDLSQNIVLIQDPEDPRKFYPRFNLEDTSSFQNLDDHSKNVLKRLYYDYYFQRQENLWRQNALKTLPALLNSSEMLACGEDLGLIPSCVHPVMQELGLVGLRIQRMPNEPGLEFGIPSQYSYMTVCAPSCHDCSTLRAWWEEDEERRQRFFKNVVESNELPPDRCDPEVAHFIIRQHVEAPSMWAIFPLQDLLALKEEYTTRPATEETINDPTNPKHYWRYRVHVTLESLNKDNELKTIIKDLVRWGGRSLPLEESQVEASSSSVAETVSEKLQFASAVEKIRLPSESNGVPTKDPVTVR* 977
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g02649 976 ProSiteProfiles CBM20 (carbohydrate binding type-20) domain profile. 155 268 IPR002044 GO:2001070
Rops8g02649 976 SUPERFAMILY Starch-binding domain-like 158 248 IPR013784 GO:0030246
Rops8g02649 976 SUPERFAMILY (Trans)glycosidases 267 919 IPR017853 -
Rops8g02649 976 Gene3D Glycosidases 720 925 - -
Rops8g02649 976 Gene3D Glycosidases 267 596 - -
Rops8g02649 976 ProSiteProfiles CBM20 (carbohydrate binding type-20) domain profile. 10 119 IPR002044 GO:2001070
Rops8g02649 976 Pfam Starch binding domain 16 108 IPR002044 GO:2001070
Rops8g02649 976 Pfam Starch binding domain 161 251 IPR002044 GO:2001070
Rops8g02649 976 Pfam 4-alpha-glucanotransferase 273 901 IPR003385 GO:0004134|GO:0005975
Rops8g02649 976 CDD CBM20_DPE2_repeat2 162 259 IPR034841 GO:2001070
Rops8g02649 976 SMART CBM_20_2 160 254 IPR002044 GO:2001070
Rops8g02649 976 SMART CBM_20_2 15 111 IPR002044 GO:2001070
Rops8g02649 976 SUPERFAMILY Starch-binding domain-like 14 117 IPR013784 GO:0030246
Rops8g02649 976 PANTHER - 13 926 - -
Rops8g02649 976 CDD CBM20_DPE2_repeat1 17 117 IPR034840 GO:2001070
Rops8g02649 976 Gene3D Immunoglobulins 8 119 IPR013783 -
Rops8g02649 976 Gene3D Immunoglobulins 154 256 IPR013783 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops8g02649 16 939 Glycoside Hydrolase AT2G40840 73.701 0.0 1467
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g02649 K00705 - gmx:100793021 1725.68