Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g02636 ATGGGTTTATCCAAGGCCTCATGCAGTGTTGCTGTGCTTCAATTGTTCATAGTGGTTTGCCTTGTCTACCAGTGCTTTGCTAACAATTTACATGCTGATCTGAACACAACTCTAATTGTAGATGCTTCCAAGGCCTCTGGAAGGCCAATACCAGAGACATTTTTTGGACTATTCTTTGAGGAGATCAATCATGCTGGAGCGGGGGGATTGTGGGCTGAGCTTGTGAGCAACAGAGGATTTGAAGCTGGGGGCCCTAACACTCCTTCGAATATTGATCCTTGGTCAATTATTGGAAATGAATCATCTATTAATGTTGCAACTGATCGTACCTCCTGCTTTGAACGTAATAAGGTTGCACTTCGATTGGAGGTGTTATGTGACAGTAAAGGTGAAAACATCTGCCCAGCTGATGGTGTTGGTGTTTATAACCCTGGTTTCTGGGGCATGAATATTGAGCAAGGGAAGAAATACAAAGTAGTCTTCTATGTTCGCTCAACAGGATCACTTAATTTAACAGTTTCATTGACTGGATCAAATGGTGTGGGAAACCTGGCCTCAACCGTGATCACGGGATCTGCTTCTTATTTTTCCAACTGGACAAAGGTGGAGACTTTATTGGAGGCCAAAGCAACGAATCGAAACTCAAGACTTCAATTAACAACAACCACAAAAGGTGTGATATGGTTGGACCAAGTGTCTGCTATGCCACAGGACACATATAAGGGACATGGTTTCCGAAGTGAACTTGTTGAAATGCTGGCAGATATGAAACCAAGATTTATCAGATTTCCAGGTGGTTGTTTTGTTGAAGGAGAATGGTTAAGAAATGCATTTCGATGGAAAGCAACTGTTGGACCTTGGGAGGAGAGACCTGGGCACTTCGGTGATGTTTGGATGTACTGGACTGATGATGGACTTGGCTATTTTGAGTTTCTCCAGCTAGCAGAAGACTTGGGTACTTTACCTATATGGGTGTTTAATAATGGTGTCAGCCATAATGATCAAGTTGATACATCGTCCGTCTTACCTTTTGTGCAAGAAGCCCTTGATGGAATTGAGTTTGCAAGAGGTGATCCCACTTCAAAATGGGGTTCCATGAGAGCTGCTATGGGACACCCAGAGCCATTTGACCTAAGATATGTTGCTGTGGGAAATGAGGATTGTGGAAAAAAGAACTATCGGGGAAACTACCTGAAATTCTATAGTGCAATAAGACAGGCTTATCCAGATATCCAAATCATCTCAAATTGTGATGGTTCTTCTCGACCTTTAGATCACCCAGCTGATCTATATGATTATCATGTTTATACAAATGCGAATGACATGTTTTCTAGAGCTAACACATTCAATCGTGCATCAAGAAGTGGTCCAAAGGCTTTTGTAAGTGAGTACGCAGTCACCGGAAAAGATGCTGGAACGGGAAGCCTTTTGGCAGCCCTAGGTGAAGCTGGGTTCCTTATTGGACTGGAAAAGAACAGTGATGTTATCAGCATGGTTAGCTATGCTCCACTTTTTGTAAATGCCAATGATAGGAGGTGGAACCCAGATGCAATTGTATTCAACTCTTTTCAGCAATATGGAACTCCTAGCTACTGGGTGCAACTATTTTTCTCAGAGTCAAGTGGAGCAACACTTCTGAATTCATCATTTCAAACAACTTCCTCAAATTCACTTATTGCATCAGCAATTACTTGGGAAAATTCTGTAGATAAGAAAAATTACATACGAATAAAGGTTGTGAACTTTGGTGTGGACACTGTGAACCTCAAGATTTCTTTTGATGGATTAGACCCTAATTCATTTCAGTTATCTGGGTCAACAAAGACTGTGCTAACATCTGCAAATTTAATGGATGAGAATTCCTTCTCACTGCCAAAGAAGGTGGTTCCAATTCAGAGTCTACTTCAAAATGTTGGGAAGGACATGAATGTCATAGTGCCACCACATTCATTCTCATCATTTGATTTGTTGAAAGAATCAAGCTTCATTTTGCTCTATTCCTTTGTGGTTTGTTTACTTGCTTTCCAATGCTATGCTGAAGCAAACCAGATCTCAACACTAGCTGTAGATGCTTCTGAAGAGGATTCCTGA 2091 0.4142 MGLSKASCSVAVLQLFIVVCLVYQCFANNLHADLNTTLIVDASKASGRPIPETFFGLFFEEINHAGAGGLWAELVSNRGFEAGGPNTPSNIDPWSIIGNESSINVATDRTSCFERNKVALRLEVLCDSKGENICPADGVGVYNPGFWGMNIEQGKKYKVVFYVRSTGSLNLTVSLTGSNGVGNLASTVITGSASYFSNWTKVETLLEAKATNRNSRLQLTTTTKGVIWLDQVSAMPQDTYKGHGFRSELVEMLADMKPRFIRFPGGCFVEGEWLRNAFRWKATVGPWEERPGHFGDVWMYWTDDGLGYFEFLQLAEDLGTLPIWVFNNGVSHNDQVDTSSVLPFVQEALDGIEFARGDPTSKWGSMRAAMGHPEPFDLRYVAVGNEDCGKKNYRGNYLKFYSAIRQAYPDIQIISNCDGSSRPLDHPADLYDYHVYTNANDMFSRANTFNRASRSGPKAFVSEYAVTGKDAGTGSLLAALGEAGFLIGLEKNSDVISMVSYAPLFVNANDRRWNPDAIVFNSFQQYGTPSYWVQLFFSESSGATLLNSSFQTTSSNSLIASAITWENSVDKKNYIRIKVVNFGVDTVNLKISFDGLDPNSFQLSGSTKTVLTSANLMDENSFSLPKKVVPIQSLLQNVGKDMNVIVPPHSFSSFDLLKESSFILLYSFVVCLLAFQCYAEANQISTLAVDASEEDS* 697
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g02636 696 SUPERFAMILY Galactose-binding domain-like 73 233 IPR008979 -
Rops8g02636 696 Gene3D - 539 656 IPR013780 -
Rops8g02636 696 PANTHER ALPHA-L-ARABINOFURANOSIDASE 1 1 661 - -
Rops8g02636 696 FunFam Alpha-L-arabinofuranosidase 1 232 538 - -
Rops8g02636 696 SMART alpha_l_af_c 462 650 IPR010720 GO:0046373|GO:0046556
Rops8g02636 696 FunFam Alpha-L-arabinofuranosidase 1 538 657 - -
Rops8g02636 696 SUPERFAMILY (Trans)glycosidases 214 545 IPR017853 -
Rops8g02636 696 FunFam Putative alpha-L-arabinofuranosidase family protein 71 231 - -
Rops8g02636 696 Gene3D Glycosidases 219 538 - -
Rops8g02636 696 Pfam Alpha-L-arabinofuranosidase C-terminal domain 463 650 IPR010720 GO:0046373|GO:0046556
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g02636 Rops-Chr8 59923900 59935986 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops8g02636 9 665 Glycoside Hydrolase AT3G10740 71.212 0.0 989
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g02636 K01209 - gmx:100787207 1203.35